RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ADOQ96SZ5 270 aa12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 MRPL1Q9BYD6 325 aaKnown RBP12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 STMN4Q9H169 189 aaPredicted RBP12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 OPN3Q9H1Y3 402 aaPredicted RBP12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 PTGES2Q9H7Z7 377 aa12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 PAQR5Q9NXK6 330 aaPredicted RBP12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 MED12Q93074 2177 aa12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 HS3ST1O14792 307 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 ERAL1O75616 437 aaKnown RBP12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 KLHL2O95198 593 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 TP53P04637 393 aaPredicted RBP12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 CT45A8P0DMV1 189 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 CT45A9P0DMV2 189 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 FEN1P39748 380 aaKnown RBP12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 ARL1P40616 181 aaPredicted RBP12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 PAFAH1B1P43034 410 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 CCNG1P51959 295 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 GAS1P54826 345 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 ATP5J2P56134 94 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 CT45A2Q5DJT8 189 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 TTC19Q6DKK2 380 aaPredicted RBP12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 DESI1Q6ICB0 168 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 ADAM5Q6NVV9 412 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 LARP4Q71RC2 724 aaKnown RBP eCLIP12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 METTL25Q8N6Q8 603 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 PPM1NQ8N819 430 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 FADS6Q8N9I5 356 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 OR6K3Q8NGY3 331 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 KCTD4Q8WVF5 259 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 ZNF681Q96N22 645 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 PIGQQ9BRB3 760 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 TMEM204Q9BSN7 226 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 ELOVL6Q9H5J4 265 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 NOL11Q9H8H0 719 aaKnown RBP12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 EHD3Q9NZN3 535 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 PPP4R1LQ9P1A2 415 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 HEY2Q9UBP5 337 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 NFU1Q9UMS0 254 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 SNX24Q9Y343 169 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 EMC9Q9Y3B6 208 aa12.87□□□□□ -0.35
LYSMD3-202ENST00000453259 FAM187AA6NFU0 413 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 STX16-NPEPL1H3BU86 382 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 OR7A17O14581 309 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 STX16O14662 325 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 SLITRK5O94991 958 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 C2P06681 752 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 PCSK2P16519 638 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 IL11P20809 199 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 RPS4XP62701 263 aaKnown RBP12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 CAV1Q03135 178 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 KRTAP1-1Q07627 177 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 TRMT12Q53H54 448 aaKnown RBP12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 ZNF628Q5EBL2 1059 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 RAET1LQ5VY80 246 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 PLXDC2Q6UX71 529 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 ZNF550Q7Z398 422 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 UBQLNLQ8IYU4 475 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 ZNF610Q8N9Z0 462 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 TMEM158Q8WZ71 300 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 FIG4Q92562 907 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 CNRIP1Q96F85 164 aaPredicted RBP12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 TRMT61AQ96FX7 289 aaKnown RBP12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 GMPPAQ96IJ6 420 aaPredicted RBP12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 VSTM2LQ96N03 204 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 ERP44Q9BS26 406 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 PINK1Q9BXM7 581 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 PLSCR4Q9NRQ2 329 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 GLRX2Q9NS18 164 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 TAS2R9Q9NYW1 312 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 SNX8Q9Y5X2 465 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 SAR1BQ9Y6B6 198 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 AP4B1Q9Y6B7 739 aa12.86□□□□□ -0.35
LYSMD3-202ENST00000453259 RNF212BA8MTL3 300 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 KLF4O43474 513 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 PLOD3O60568 738 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 HSD3B1P14060 373 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 HSD3B2P26439 372 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 EVI2BP34910 448 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 GSTM5P46439 218 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 SIRPAP78324 504 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 GALNT1Q10472 559 aaPredicted RBP12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 TRAF3Q13114 568 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 TNK1Q13470 666 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 CAPRIN1Q14444 709 aaKnown RBP12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 PON3Q15166 354 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 BEND4Q6ZU67 534 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 STK32CQ86UX6 486 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 EXOC3L1Q86VI1 746 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 OR52B6Q8NGF0 335 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 FNDC9Q8TBE3 224 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 GTPBP3Q969Y2 492 aaKnown RBP12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 TM4SF18Q96CE8 201 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 ZC3HAV1LQ96H79 300 aaKnown RBP12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 KLHL4Q9C0H6 718 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 ZBTB26Q9HCK0 441 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 GIMAP4Q9NUV9 329 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 UTS2RQ9UKP6 389 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 SNX6Q9UNH7 406 aa12.85□□□□□ -0.35
LYSMD3-202ENST00000453259 SLC12A4Q9UP95 1085 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms