RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 PGRMC2O15173 223 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 TBX19O60806 448 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 LRATO95237 230 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 PGRP06401 933 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 IL3P08700 152 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 CD1EP15812 388 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 MAGEA5P43359 124 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 KIR3DL1P43629 444 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 KCNJ2P63252 427 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 HEPACAMQ14CZ8 416 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 MMEL1Q495T6 779 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 DNAL1Q4LDG9 190 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 SPANXN4Q5MJ08 99 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 C6orf163Q5TEZ5 329 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 HACD2Q6Y1H2 254 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 FAM109AQ8N4B1 249 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 TMEM251Q8N6I4 163 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 PCYOX1LQ8NBM8 494 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 FAM13CQ8NE31 585 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 OR8J2Q8NGG1 315 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 UCN3Q969E3 161 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 SLC7A6OSQ96CW6 309 aaPredicted RBP16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 SPACA9Q96E40 222 aaPredicted RBP16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 PRPF18Q99633 342 aaKnown RBP16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 LDAHQ9H6V9 325 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 EFCAB1Q9HAE3 211 aa16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 TEX10Q9NXF1 929 aaPredicted RBP16.57■□□□□ 0.24
SQSTM1-204ENST00000453046 OR6C76A6NM76 312 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 FBP2O00757 339 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 MRASO14807 208 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 AKAP10O43572 662 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 GLSO94925 669 aaPredicted RBP16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 DRD2P14416 443 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 DDCP20711 480 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 S100A3P33764 101 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 GALNSP34059 522 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 PIGAP37287 484 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 NUDT2P50583 147 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 NR0B1P51843 470 aaKnown RBP16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 SLC37A1P57057 533 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 MXRA7P84157 204 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 ZNF791Q3KP31 576 aaPredicted RBP16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 VPS26BQ4G0F5 336 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 PRAMEF20Q5VT98 475 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 HLA-DQA1Q5Y7H0 255 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 GALNT12Q8IXK2 581 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 DND1Q8IYX4 353 aaKnown RBP16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 TAGAPQ8N103 731 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 OR4K14Q8NGD5 310 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 GFM2Q969S9 779 aaKnown RBP16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 ROPN1LQ96C74 230 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 TM4SF18Q96CE8 201 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 WWTR1Q9GZV5 400 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 EXO5Q9H790 373 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 MIEF1Q9NQG6 463 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 ATAD3AQ9NVI7 634 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 FAM120CQ9NX05 1096 aaKnown RBP16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 TUBA8Q9NY65 449 aaPredicted RBP16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 EHD3Q9NZN3 535 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 HRH3Q9Y5N1 445 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 ABCA12Q86UK0 2595 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 PKDREJQ9NTG1 2253 aa16.56■□□□□ 0.24
SQSTM1-204ENST00000453046 C2orf92A0A1B0GVN3 265 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 B2RBV5 119 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 C19orf84I3L1E1 186 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 AIM2O14862 343 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 BCKDKO14874 412 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 NADKO95544 446 aaPredicted RBP16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 XKP51811 444 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 C2orf80Q0P641 193 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 LRRC74AQ0VAA2 488 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 SLC10A1Q14973 349 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 EBPQ15125 230 aaKnown RBP16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 GXYLT1Q4G148 440 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 CPTPQ5TA50 214 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 C16orf89Q6UX73 402 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 DPP10Q8N608 796 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 NATD1Q8N6N6 113 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 RBM15BQ8NDT2 890 aaKnown RBP16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 OR5M9Q8NGP3 310 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 OR5M3Q8NGP4 307 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 PAQR8Q8TEZ7 354 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 ASB5Q8WWX0 329 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 RND1Q92730 232 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 VPS33AQ96AX1 596 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 PPCDCQ96CD2 204 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 KLHL29Q96CT2 875 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 COQ8BQ96D53 544 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 BTBD10Q9BSF8 475 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 BHLHE41Q9C0J9 482 aaPredicted RBP16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 RMND5AQ9H871 391 aa16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 RYDENQ9NUL5 291 aaKnown RBP16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 BOKQ9UMX3 212 aaPredicted RBP16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 EXO1Q9UQ84 846 aaKnown RBP16.55■□□□□ 0.24
SQSTM1-204ENST00000453046 ZNF407Q9C0G0 2248 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 OR14I1A6ND48 311 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 IGHG3P01860 377 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 KRT16P08779 473 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 FBXO45P0C2W1 286 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms