RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 OTOGLQ3ZCN5 2332 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 COL12A1Q99715 3063 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 MYOM3Q5VTT5 1437 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 VPS8Q8N3P4 1428 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 FRYLO94915 3013 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 A0A1B0GUA9 196 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 ILVBLA1L0T0 632 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 YDJCA8MPS7 323 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 SERPINE3A8MV23 424 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 SLC17A2O00624 439 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 PSMD3O43242 534 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 DUSP11O75319 330 aaKnown RBP1.17□□□□□ -2.22
LRCH3-209ENST00000452660 PDGFRAP16234 1089 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 UGT1A6P19224 532 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 GLRA1P23415 457 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 AXLP30530 894 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 DIO3P55073 304 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 KRTAP12-4P60329 112 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 LCP2Q13094 533 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 TWISTNBQ3B726 338 aaPredicted RBP1.17□□□□□ -2.22
LRCH3-209ENST00000452660 SBK1Q52WX2 424 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 SPATA46Q5T0L3 261 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 RHBDD2Q6NTF9 364 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 MZT2BQ6NZ67 158 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 CADM2Q8N3J6 435 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 OR4F5Q8NH21 305 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 DEDD2Q8WXF8 326 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 SEPT8Q92599 483 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 PNPLA2Q96AD5 504 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 PGAP3Q96FM1 320 aaPredicted RBP1.17□□□□□ -2.22
LRCH3-209ENST00000452660 DPH7Q9BTV6 452 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 GPR173Q9NS66 373 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 SEC14L4Q9UDX3 406 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 RALGAPA2Q2PPJ7 1873 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 BIRC6Q9NR09 4857 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 SCN9AQ15858 1988 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 LRRC37AA6NMS7 1700 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 DDX60Q8IY21 1712 aaKnown RBP1.17□□□□□ -2.22
LRCH3-209ENST00000452660 UBR5O95071 2799 aaPredicted RBP1.17□□□□□ -2.22
LRCH3-209ENST00000452660 FRMPD3Q5JV73 1810 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 RLFQ13129 1914 aa1.17□□□□□ -2.22
LRCH3-209ENST00000452660 SPENQ96T58 3664 aaKnown RBP1.17□□□□□ -2.22
LRCH3-209ENST00000452660 FBN2P35556 2912 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 LAMB1P07942 1786 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 PIK3C2GO75747 1445 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 CSMD1Q96PZ7 3565 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 DOPEY2Q9Y3R5 2298 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 M0R296 226 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 TBX10O75333 385 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 GBAP04062 536 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 CD5P06127 495 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 PVRP15151 417 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 FUT3P21217 361 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 CPT2P23786 658 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 TIA1P31483 386 aaKnown RBP eCLIP1.16□□□□□ -2.226e-7■■■■■ 29.1
LRCH3-209ENST00000452660 ACTN2P35609 894 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 ID1P41134 155 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 NBL1P41271 181 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 OR3A1P47881 315 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 ARHGDIBP52566 201 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 SLC12A3P55017 1021 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 RPL27P61353 136 aaKnown RBP1.16□□□□□ -2.22
LRCH3-209ENST00000452660 MZT1Q08AG7 82 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 ABRQ12979 859 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 GIT2Q14161 759 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 SLC10A1Q14973 349 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 HYIQ5T013 277 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 METTL11BQ5VVY1 283 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 TAF3Q5VWG9 929 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 FAM219BQ5XKK7 198 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 STOX1Q6ZVD7 989 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 MOB1BQ7L9L4 216 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 ZNF589Q86UQ0 364 aaPredicted RBP1.16□□□□□ -2.22
LRCH3-209ENST00000452660 C4orf19Q8IY42 314 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 GPR148Q8TDV2 347 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 SECISBP2LQ93073 1101 aaKnown RBP1.16□□□□□ -2.22
LRCH3-209ENST00000452660 ERGIC2Q96RQ1 377 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 NAP1L4Q99733 375 aaKnown RBP1.16□□□□□ -2.22
LRCH3-209ENST00000452660 SPAG8Q99932 426 aaPredicted RBP1.16□□□□□ -2.22
LRCH3-209ENST00000452660 KATNB1Q9BVA0 655 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 DBNDD1Q9H9R9 158 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 Q9HAA7 133 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 LMAN1LQ9HAT1 526 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 IL1RL2Q9HB29 575 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 NEU3Q9UQ49 428 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 ATG4BQ9Y4P1 393 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 PPIAL4AQ9Y536 164 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 MTCH2Q9Y6C9 303 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 DSPP15924 2871 aaKnown RBP1.16□□□□□ -2.22
LRCH3-209ENST00000452660 IGSF10Q6WRI0 2623 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 KIF26AQ9ULI4 1882 aaPredicted RBP1.16□□□□□ -2.22
LRCH3-209ENST00000452660 SHROOM3Q8TF72 1996 aa1.16□□□□□ -2.22
LRCH3-209ENST00000452660 TTC21BQ7Z4L5 1316 aa1.15□□□□□ -2.22
LRCH3-209ENST00000452660 PCDH11XQ9BZA7 1347 aa1.15□□□□□ -2.22
LRCH3-209ENST00000452660 EPPK1P58107 5090 aaKnown RBP1.15□□□□□ -2.22
LRCH3-209ENST00000452660 ASXL3Q9C0F0 2248 aa1.15□□□□□ -2.23
LRCH3-209ENST00000452660 CREBBPQ92793 2442 aa1.15□□□□□ -2.23
LRCH3-209ENST00000452660 PCLOQ9Y6V0 5065 aa1.15□□□□□ -2.23
LRCH3-209ENST00000452660 CCL15-CCL14A0A0B4J2E2 113 aa1.15□□□□□ -2.23
LRCH3-209ENST00000452660 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms