RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 TAS2R7Q9NYW3 318 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 WIF1Q9Y5W5 379 aa11.74□□□□□ -0.53
CHD3-206ENST00000452447 NUP214P35658 2090 aaPredicted RBP11.73□□□□□ -0.53
CHD3-206ENST00000452447 HIVEP1P15822 2718 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 CD8B2A6NJW9 211 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 SLC28A1O00337 649 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 SYT5O00445 386 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 RGS14O43566 566 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 SLU7O95391 586 aaKnown RBP11.73□□□□□ -0.53
CHD3-206ENST00000452447 CHEK2O96017 543 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 CYP4B1P13584 511 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 ASCL1P50553 236 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 DLX5P56178 289 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 SRYQ05066 204 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 SLC18A2Q05940 514 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 DCST1Q5T197 706 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 OR5M10Q6IEU7 315 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 TMEM107Q6UX40 140 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 C10orf107Q8IVU9 208 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 TRIM42Q8IWZ5 723 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 OR4N2Q8NGD1 307 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 TRMOQ9BU70 441 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 GLIPR2Q9H4G4 154 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 CALHM2Q9HA72 323 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 LRTM1Q9HBL6 345 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 TNFRSF12AQ9NP84 129 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 C1orf109Q9NX04 203 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 TAS2R10Q9NYW0 307 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 FIS1Q9Y3D6 152 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 L3MBTL1Q9Y468 752 aa11.73□□□□□ -0.53
CHD3-206ENST00000452447 MAP1AP78559 2803 aaPredicted RBP11.73□□□□□ -0.53
CHD3-206ENST00000452447 KDM4EB2RXH2 506 aaPredicted RBP11.72□□□□□ -0.53
CHD3-206ENST00000452447 H0Y3Z8 333 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 PLOD2O00469 737 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 AZIN1O14977 448 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 TRIM13O60858 407 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 CPN1P15169 458 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 SRD5A2P31213 254 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 KIR2DL3P43628 341 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 PSG6Q00889 435 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 ZNHIT3Q15649 155 aaPredicted RBP11.72□□□□□ -0.53
CHD3-206ENST00000452447 DECR1Q16698 335 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 PRSS53Q2L4Q9 553 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 AAGABQ6PD74 315 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 HOMEZQ8IX15 550 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 RIBC1Q8N443 379 aaPredicted RBP11.72□□□□□ -0.53
CHD3-206ENST00000452447 RELL2Q8NC24 303 aaPredicted RBP11.72□□□□□ -0.53
CHD3-206ENST00000452447 ZPLD1Q8TCW7 415 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 AMDHD1Q96NU7 426 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 OR2B2Q9GZK3 357 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 Q9N2J8 555 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 FOXD3Q9UJU5 478 aaPredicted RBP11.72□□□□□ -0.53
CHD3-206ENST00000452447 DKKL1Q9UK85 242 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 FBXL2Q9UKC9 423 aa11.72□□□□□ -0.53
CHD3-206ENST00000452447 MRTO4Q9UKD2 239 aaKnown RBP11.72□□□□□ -0.53
CHD3-206ENST00000452447 C19orf53Q9UNZ5 99 aaPredicted RBP11.72□□□□□ -0.53
CHD3-206ENST00000452447 MBD3L4A6NDZ8 208 aaPredicted RBP11.71□□□□□ -0.53
CHD3-206ENST00000452447 MBD3L3A6NE82 208 aaPredicted RBP11.71□□□□□ -0.53
CHD3-206ENST00000452447 MBD3L5A6NJ08 208 aaPredicted RBP11.71□□□□□ -0.53
CHD3-206ENST00000452447 UPK1AO00322 258 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 NEFHP12036 1026 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 PRPH2P23942 346 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 GRK2P25098 689 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 EVI2BP34910 448 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 OPRM1P35372 400 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 ZNF136P52737 540 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 DGKQP52824 942 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 IFFO1Q0D2I5 559 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 SNTB1Q13884 538 aaKnown RBP11.71□□□□□ -0.53
CHD3-206ENST00000452447 PCLAFQ15004 111 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 KIAA0040Q15053 153 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 CYP27C1Q4G0S4 372 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 ZZZ3Q8IYH5 903 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 OR2L13Q8N349 312 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 OR4K17Q8NGC6 315 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 OR2W6PQ8NHA6 318 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 MBD3L2Q8NHZ7 208 aaPredicted RBP11.71□□□□□ -0.53
CHD3-206ENST00000452447 RNASE6Q93091 150 aaKnown RBP11.71□□□□□ -0.53
CHD3-206ENST00000452447 GFM2Q969S9 779 aaKnown RBP11.71□□□□□ -0.53
CHD3-206ENST00000452447 ELP4Q96EB1 424 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 APOPT1Q96IL0 206 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 EGLN2Q96KS0 407 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 SFXN2Q96NB2 322 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 GATA5Q9BWX5 397 aaPredicted RBP11.71□□□□□ -0.53
CHD3-206ENST00000452447 SDHAF3Q9NRP4 125 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 PPP4R1LQ9P1A2 415 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 CBLCQ9ULV8 474 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 CCL27Q9Y4X3 112 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 PTGDR2Q9Y5Y4 395 aa11.71□□□□□ -0.53
CHD3-206ENST00000452447 PDPK1O15530 556 aa11.71□□□□□ -0.54
CHD3-206ENST00000452447 SCO2O43819 266 aa11.71□□□□□ -0.54
CHD3-206ENST00000452447 TCEA1P23193 301 aaKnown RBP11.71□□□□□ -0.54
CHD3-206ENST00000452447 TACR1P25103 407 aa11.71□□□□□ -0.54
CHD3-206ENST00000452447 CTSSP25774 331 aa11.71□□□□□ -0.54
CHD3-206ENST00000452447 DPP4P27487 766 aa11.71□□□□□ -0.54
CHD3-206ENST00000452447 GPC1P35052 558 aa11.71□□□□□ -0.54
CHD3-206ENST00000452447 RFX3P48380 749 aa11.71□□□□□ -0.54
CHD3-206ENST00000452447 CLK3P49761 638 aaKnown RBP11.71□□□□□ -0.54
CHD3-206ENST00000452447 AGFG1P52594 562 aaKnown RBP11.71□□□□□ -0.54
CHD3-206ENST00000452447 PSMD4P55036 377 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms