RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 PNLIPRP2P54317 469 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 CKAP4Q07065 602 aaKnown RBP9.86□□□□□ -0.83
USP1-204ENST00000452143 RASA2Q15283 850 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 POU4F3Q15319 338 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 SPIN4Q56A73 249 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 CT45A2Q5DJT8 189 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 CXorf67Q86X51 503 aaPredicted RBP9.86□□□□□ -0.83
USP1-204ENST00000452143 RDH11Q8TC12 318 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 PIGTQ969N2 578 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 ADOQ96SZ5 270 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 STMN4Q9H169 189 aaPredicted RBP9.86□□□□□ -0.83
USP1-204ENST00000452143 PFDN4Q9NQP4 134 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 GIMAP4Q9NUV9 329 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 ZNF226Q9NYT6 803 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 ZNF180Q9UJW8 692 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 FBXL2Q9UKC9 423 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 NFU1Q9UMS0 254 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 ATRQ13535 2644 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 SLC22A20A6NK97 555 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 LINC01387J3KSC0 135 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 PCDH7O60245 1069 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 PLOD3O60568 738 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 SLITRK5O94991 958 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 ESRRBO95718 433 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 TGM6O95932 706 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 PEPDP12955 493 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 GRK2P25098 689 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 DPP4P27487 766 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 STARP49675 285 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 DSCR4P56555 118 aaPredicted RBP9.85□□□□□ -0.83
USP1-204ENST00000452143 CORO7P57737 925 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 EEFSECP57772 596 aaKnown RBP9.85□□□□□ -0.83
USP1-204ENST00000452143 ETF1P62495 437 aaKnown RBP9.85□□□□□ -0.83
USP1-204ENST00000452143 FGFBP1Q14512 234 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 GANABQ14697 944 aaKnown RBP9.85□□□□□ -0.83
USP1-204ENST00000452143 HEPACAMQ14CZ8 416 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 Q5PR19 223 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 FAM180BQ6P0A1 224 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 CLEC9AQ6UXN8 241 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 LARP4Q71RC2 724 aaKnown RBP eCLIP9.85□□□□□ -0.83
USP1-204ENST00000452143 CHMP1BQ7LBR1 199 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 P4HA3Q7Z4N8 544 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 LCA5Q86VQ0 697 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 OR9A2Q8NGT5 310 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 ZNF592Q92610 1267 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 HBEGFQ99075 208 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 CDC42EP4Q9H3Q1 356 aaKnown RBP9.85□□□□□ -0.83
USP1-204ENST00000452143 TAS2R9Q9NYW1 312 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 SENP1Q9P0U3 644 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 HEY2Q9UBP5 337 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 ZNF225Q9UK10 706 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 ABCG2Q9UNQ0 655 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 STK38LQ9Y2H1 464 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 DSCAMO60469 2012 aa9.85□□□□□ -0.83
USP1-204ENST00000452143 ROS1P08922 2347 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 COL6A5A8TX70 2615 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 GNG14A0A1W2PPG7 69 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 MANBAO00462 879 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 PPP6CO00743 305 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 CTIFO43310 598 aaKnown RBP9.84□□□□□ -0.83
USP1-204ENST00000452143 ZIC3O60481 467 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 SMPD2O60906 423 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 COQ9O75208 318 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 SMNDC1O75940 238 aaKnown RBP eCLIP9.84□□□□□ -0.83
USP1-204ENST00000452143 OR4F21O95013 312 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 IL3P08700 152 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 FPR1P21462 350 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 CRYGSP22914 178 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 EVI2BP34910 448 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 MPIP34949 423 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 CD79BP40259 229 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 MC3RP41968 323 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 GAS1P54826 345 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 CDH13P55290 713 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 B3GALT5-AS1P59052 145 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 SLC7A5Q01650 507 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 OCRLQ01968 901 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 CLCQ05315 142 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 ACSM2AQ08AH3 577 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 ACSM2BQ68CK6 577 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 GALNT18Q6P9A2 607 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 PRSS57Q6UWY2 283 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 PLXDC2Q6UX71 529 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 NPSR1Q6W5P4 371 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 RPS27LQ71UM5 84 aaKnown RBP9.84□□□□□ -0.83
USP1-204ENST00000452143 P3H2Q8IVL5 708 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 CCDC116Q8IYX3 515 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 FAM9CQ8IZT9 166 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 TMEM151AQ8N4L1 468 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 MEIOBQ8N635 442 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 CDYL2Q8N8U2 506 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 CNEP1R1Q8N9A8 125 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 FADS6Q8N9I5 356 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 OR4K17Q8NGC6 315 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 CAVIN3Q969G5 261 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 STARD4Q96DR4 205 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 MTBPQ96DY7 904 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 ARSGQ96EG1 525 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 COX4I2Q96KJ9 171 aa9.84□□□□□ -0.83
USP1-204ENST00000452143 ZNF382Q96SR6 550 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms