RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TIFAQ96CG3 184 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 MED18Q9BUE0 208 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 ACAD8Q9UKU7 415 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 CLCA2Q9UQC9 943 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 KCNK5O95279 499 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 H2AFB1P0C5Y9 115 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 H2AFB2P0C5Z0 115 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 CCR2P41597 374 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 FAM46DQ8NEK8 389 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 FIBINQ8TAL6 211 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 TMEM163Q8TC26 289 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 TCF25Q9BQ70 676 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 GULP1Q9UBP9 304 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 LSM2Q9Y333 95 aaKnown RBP12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 ASB1Q9Y576 335 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 IRAK3Q9Y616 596 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 GNG14A0A1W2PPG7 69 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 SSNA1O43805 119 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 CHI3L1P36222 383 aaPredicted RBP12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 CRATP43155 626 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 AVPR1BP47901 424 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 SELENOWP63302 87 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 LMAN2Q12907 356 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 WASH2PQ6VEQ5 465 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 ZNF565Q8N9K5 539 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 WDR20Q8TBZ3 569 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 MRPS24Q96EL2 167 aaKnown RBP12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 NELL2Q99435 816 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 SLC46A2Q9BY10 475 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 SERHLQ9NQF3 203 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 SLC22A11Q9NSA0 550 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 WBP1LQ9NX94 342 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 MOSPD3O75425 235 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 KRT74Q7RTS7 529 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 OR4A15Q8NGL6 344 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 SLC9A8Q9Y2E8 581 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 CDH23Q9H251 3354 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 PIPP12273 146 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 C21orf58P58505 322 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 C18orf21Q32NC0 220 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 ZNF528Q3MIS6 628 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 XKR6Q5GH73 641 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 ZNF425Q6IV72 752 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 BTN2A1Q7KYR7 527 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 C12orf45Q8N5I9 185 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 BEST4Q8NFU0 473 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 UBE2E3Q969T4 207 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 ELP4Q96EB1 424 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 MS4A3Q96HJ5 214 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 PDCD10Q9BUL8 212 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 BRF2Q9HAW0 419 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 TMEM184CQ9NVA4 438 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 RLIMQ9NVW2 624 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 DLGAP4Q9Y2H0 992 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 GPR39O43194 453 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 IFNW1P05000 195 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 HBQ1P09105 142 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 CD70P32970 193 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 KCNJ3P48549 501 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 STK19P49842 368 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 CDH12P55289 794 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 SYTL3Q4VX76 610 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 ARHGAP15Q53QZ3 475 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 C3orf38Q5JPI3 329 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 DGKKQ5KSL6 1271 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 SLC25A25Q6KCM7 469 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 LINC00471Q8N535 108 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 SYT14Q8NB59 555 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 SP7Q8TDD2 431 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 C2CD4CQ8TF44 421 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 C1GALT1C1Q96EU7 318 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 MNTQ99583 582 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 PTDSS2Q9BVG9 487 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 ELOVL2Q9NXB9 296 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 TRBV5-4A0A0C4DH59 114 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 D6RAR5 112 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 CASC3O15234 703 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 GADD45GO95257 159 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 SMIM6P0DI80 62 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 NTRK2Q16620 822 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 ASZ1Q8WWH4 475 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 SARGQ9BW04 601 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 NLNQ9BYT8 704 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 METTL17Q9H7H0 456 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 CFAP97Q9P2B7 532 aa12.69□□□□□ -0.38
SYNGAP1-204ENST00000449372 ANXA2P2A6NMY6 339 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 L7N2F9 121 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 SEMG1P04279 462 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 ANXA4P09525 319 aaPredicted RBP12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 PTAFRP25105 342 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 PTBP1P26599 531 aaKnown RBP eCLIP12.68□□□□□ -0.382e-8■■■■□ 23.3
SYNGAP1-204ENST00000449372 MMP12P39900 470 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 BDKRB1P46663 353 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 SNRPD1P62314 119 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 GRIN2CQ14957 1233 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 EXOC3L2Q2M3D2 409 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 TMIGD1Q6UXZ0 262 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 SHFQ7M4L6 423 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 SYNPOQ8N3V7 929 aa12.68□□□□□ -0.38
SYNGAP1-204ENST00000449372 TBC1D19Q8N5T2 526 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms