RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 KPNB1Q14974 876 aaKnown RBP13.54□□□□□ -0.24
TNF-208ENST00000449264 MAPK11Q15759 364 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 FXNQ16595 210 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 HEPHL1Q6MZM0 1159 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 REEP3Q6NUK4 255 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 C16orf47Q6ZP98 133 aaPredicted RBP13.54□□□□□ -0.24
TNF-208ENST00000449264 SPPL2CQ8IUH8 684 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 PRR22Q8IZ63 422 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 ZNF248Q8NDW4 579 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 M1APQ8TC57 530 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 ELP5Q8TE02 316 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 LRGUKQ96M69 825 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 NSMCE2Q96MF7 247 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 BTBD2Q9BX70 525 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 MUC13Q9H3R2 512 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 RUBCNLQ9H714 662 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 ACTR3BQ9P1U1 418 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 CBLCQ9ULV8 474 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 LIPT1Q9Y234 373 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 RRP15Q9Y3B9 282 aaKnown RBP13.54□□□□□ -0.24
TNF-208ENST00000449264 FRG2CA6NGY1 282 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 TTC36A6NLP5 189 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 ACOT8O14734 319 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 ZFAND5O76080 213 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 OPN1SWP03999 348 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 WT1P19544 449 aaPredicted RBP13.53□□□□□ -0.24
TNF-208ENST00000449264 TRHRP34981 398 aaPredicted RBP13.53□□□□□ -0.24
TNF-208ENST00000449264 POLE2P56282 527 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 DCAF7P61962 342 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 MRPS22P82650 360 aaKnown RBP13.53□□□□□ -0.24
TNF-208ENST00000449264 TRAP1Q12931 704 aaKnown RBP13.53□□□□□ -0.24
TNF-208ENST00000449264 VEZF1Q14119 521 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 GNA13Q14344 377 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 ARHGAP11BQ3KRB8 267 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 INTS11Q5TA45 600 aaKnown RBP13.53□□□□□ -0.24
TNF-208ENST00000449264 HMGN2P46Q86SG4 172 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 SLC30A8Q8IWU4 369 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 IP6K3Q96PC2 410 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 TREX2Q9BQ50 279 aaPredicted RBP13.53□□□□□ -0.24
TNF-208ENST00000449264 TRIM15Q9C019 465 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 DENND2DQ9H6A0 471 aaPredicted RBP13.53□□□□□ -0.24
TNF-208ENST00000449264 MMP25Q9NPA2 562 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 V9GYQ6 96 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 MED13Q9UHV7 2174 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 EXPH5Q8NEV8 1989 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 WWP2O00308 870 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 NKX2-8O15522 239 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 KCNK2O95069 426 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 AK1P00568 194 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 ITGAMP11215 1152 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 CHRNEQ04844 493 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 Q0VFX4 171 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 LCN8Q6JVE9 175 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 SPATA24Q86W54 205 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 PROSER1Q86XN7 944 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 ZNF441Q8N8Z8 693 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 ZSCAN1Q8NBB4 408 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 OR5L2Q8NGL0 311 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 NUBPLQ8TB37 319 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 TMBIM1Q969X1 311 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 EFHD2Q96C19 240 aaPredicted RBP13.53□□□□□ -0.24
TNF-208ENST00000449264 TRNT1Q96Q11 434 aaKnown RBP13.53□□□□□ -0.24
TNF-208ENST00000449264 SDF2Q99470 211 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 FBXO34Q9NWN3 711 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 MKLN1Q9UL63 735 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 WDR45Q9Y484 360 aa13.53□□□□□ -0.24
TNF-208ENST00000449264 NINQ8N4C6 2090 aa13.52□□□□□ -0.24
TNF-208ENST00000449264 NPIPA5A0A0B4J1W7 369 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 NPIPA7E9PJI5 369 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 FCMRO60667 390 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 PGM3O95394 542 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 ZIC2O95409 532 aaPredicted RBP13.52□□□□□ -0.25
TNF-208ENST00000449264 SERPINA1P01009 418 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 NPIPA8P0DM63 369 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 ICAM2P13598 275 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 ATP6V1C1P21283 382 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 DRD5P21918 477 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 PIGAP37287 484 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 PLCXD2Q0VAA5 305 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 GPR68Q15743 365 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 DECR1Q16698 335 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 DCAF10Q5QP82 559 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 FCRLBQ6BAA4 426 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 TCTN3Q6NUS6 607 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 FRRS1Q6ZNA5 592 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 LRRC74BQ6ZQY2 392 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 BCORP1Q8N888 145 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 CHDHQ8NE62 594 aaPredicted RBP13.52□□□□□ -0.25
TNF-208ENST00000449264 OR8K3Q8NH51 312 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 SNIP1Q8TAD8 396 aaKnown RBP13.52□□□□□ -0.25
TNF-208ENST00000449264 BBS10Q8TAM1 723 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 COL21A1Q96P44 957 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 ZNF350Q9GZX5 532 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 QRSL1Q9H0R6 528 aaKnown RBP13.52□□□□□ -0.25
TNF-208ENST00000449264 SLC38A1Q9H2H9 487 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 CCDC86Q9H6F5 360 aaKnown RBP13.52□□□□□ -0.25
TNF-208ENST00000449264 CALML5Q9NZT1 146 aa13.52□□□□□ -0.25
TNF-208ENST00000449264 CHD8Q9HCK8 2581 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 ACOX3O15254 700 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 STX11O75558 287 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms