RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 TO15178 435 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 SLC28A2O43868 658 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 PDE9AO76083 593 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 GPIP06744 558 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 HNRNPCL4P0DMR1 293 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 UMPSP11172 480 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 GABRA3P34903 492 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 PIGAP37287 484 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 POU6F2P78424 691 aaPredicted RBP17.85■□□□□ 0.45
RPS28-202ENST00000449223 TBC1D25Q3MII6 688 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 CYP27C1Q4G0S4 372 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 DCST2Q5T1A1 773 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 AAGABQ6PD74 315 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 HSDL2Q6YN16 418 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 CBLL1Q75N03 491 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 SLC29A4Q7RTT9 530 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 M1APQ8TC57 530 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 FAM162AQ96A26 154 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 TP53INP1Q96A56 240 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 LCORQ96JN0 433 aaPredicted RBP17.85■□□□□ 0.45
RPS28-202ENST00000449223 IP6K3Q96PC2 410 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 SDF2Q99470 211 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 EFHD1Q9BUP0 239 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 MMP25Q9NPA2 562 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 KLK13Q9UKR3 277 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 SAMD4AQ9UPU9 718 aaKnown RBP17.85■□□□□ 0.45
RPS28-202ENST00000449223 AK5Q9Y6K8 562 aa17.85■□□□□ 0.45
RPS28-202ENST00000449223 ACOX3O15254 700 aa17.84■□□□□ 0.45
RPS28-202ENST00000449223 FKBP6O75344 327 aa17.84■□□□□ 0.45
RPS28-202ENST00000449223 KCNK2O95069 426 aa17.84■□□□□ 0.45
RPS28-202ENST00000449223 H6PDO95479 791 aa17.84■□□□□ 0.45
RPS28-202ENST00000449223 HOXB6P17509 224 aaKnown RBP17.84■□□□□ 0.45
RPS28-202ENST00000449223 RNF4P78317 190 aa17.84■□□□□ 0.45
RPS28-202ENST00000449223 IL10RAQ13651 578 aa17.84■□□□□ 0.45
RPS28-202ENST00000449223 SPATA24Q86W54 205 aa17.84■□□□□ 0.45
RPS28-202ENST00000449223 PIK3R3Q92569 461 aa17.84■□□□□ 0.45
RPS28-202ENST00000449223 KIAA1143Q96AT1 154 aaPredicted RBP17.84■□□□□ 0.45
RPS28-202ENST00000449223 RYDENQ9NUL5 291 aaKnown RBP17.84■□□□□ 0.45
RPS28-202ENST00000449223 RPS6KA6Q9UK32 745 aa17.84■□□□□ 0.45
RPS28-202ENST00000449223 PCSK5Q92824 1860 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 TMEM229AB2RXF0 380 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 STX11O75558 287 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 ZIC2O95409 532 aaPredicted RBP17.83■□□□□ 0.45
RPS28-202ENST00000449223 HPP00738 406 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 SERPINA1P01009 418 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 IFNA14P01570 189 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 MRPS22P82650 360 aaKnown RBP17.83■□□□□ 0.45
RPS28-202ENST00000449223 FOXC1Q12948 553 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.83■□□□□ 0.45
RPS28-202ENST00000449223 GPAT3Q53EU6 434 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 ZFP1Q6P2D0 407 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 FRRS1Q6ZNA5 592 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 EIF3MQ7L2H7 374 aaKnown RBP17.83■□□□□ 0.45
RPS28-202ENST00000449223 MRGPREQ86SM8 312 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 RAB43Q86YS6 212 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 SLC44A2Q8IWA5 706 aaPredicted RBP17.83■□□□□ 0.45
RPS28-202ENST00000449223 TAMM41Q96BW9 452 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 HSPBAP1Q96EW2 488 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 ZNF607Q96SK3 696 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 NXF5Q9H1B4 397 aaKnown RBP17.83■□□□□ 0.45
RPS28-202ENST00000449223 GPN2Q9H9Y4 310 aaPredicted RBP17.83■□□□□ 0.45
RPS28-202ENST00000449223 IL17BQ9UHF5 180 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 CBLCQ9ULV8 474 aa17.83■□□□□ 0.45
RPS28-202ENST00000449223 SPTBN2O15020 2390 aa17.83■□□□□ 0.44
RPS28-202ENST00000449223 AKAP13Q12802 2813 aa17.83■□□□□ 0.44
RPS28-202ENST00000449223 NSG1A0A0A6YYJ2 146 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 DHRS12A0PJE2 317 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 GXYLT2A0PJZ3 443 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 M0QX08 132 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 KIAA0513O60268 411 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 MFN2O95140 757 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 ICAM2P13598 275 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 AQP1P29972 269 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 PLA2G5P39877 138 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 HPCAP84074 193 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 LRRC23Q53EV4 343 aaPredicted RBP17.82■□□□□ 0.44
RPS28-202ENST00000449223 RPS26P11Q5JNZ5 115 aaPredicted RBP17.82■□□□□ 0.44
RPS28-202ENST00000449223 TYW3Q6IPR3 259 aaKnown RBP17.82■□□□□ 0.44
RPS28-202ENST00000449223 KRT73Q86Y46 540 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 ADGRG5Q8IZF4 528 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 ARMC10Q8N2F6 343 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 OR5L2Q8NGL0 311 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 SLC26A7Q8TE54 656 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 RASSF5Q8WWW0 418 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 OIT3Q8WWZ8 545 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 G6PC3Q9BUM1 346 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 SCNM1Q9BWG6 230 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 MTHFD2LQ9H903 347 aaPredicted RBP17.82■□□□□ 0.44
RPS28-202ENST00000449223 CCM2LQ9NUG4 571 aaPredicted RBP17.82■□□□□ 0.44
RPS28-202ENST00000449223 WDR45Q9Y484 360 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 FREM2Q5SZK8 3169 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 TMEM200CA6NKL6 621 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 PRKNO60260 465 aaPredicted RBP17.82■□□□□ 0.44
RPS28-202ENST00000449223 SERPINB7O75635 380 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 ZFAND5O76080 213 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 RPS4Y1P22090 263 aaKnown RBP17.82■□□□□ 0.44
RPS28-202ENST00000449223 PSMA4P25789 261 aaKnown RBP17.82■□□□□ 0.44
RPS28-202ENST00000449223 SLC7A1P30825 629 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 OTX2P32243 289 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 CHRNEQ04844 493 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms