RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 SARAFQ96BY9 339 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 PPCDCQ96CD2 204 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 COQ8BQ96D53 544 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 GIMAP5Q96F15 307 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 TIMP4Q99727 224 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 TTYH2Q9BSA4 534 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 LDAHQ9H6V9 325 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 ACAD8Q9UKU7 415 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 PRAMEF25A6NGN4 478 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 C19orf84I3L1E1 186 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 GNB5O14775 395 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 PDPK1O15530 556 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 COQ9O75208 318 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 ZWINTO95229 277 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 HOXD4P09016 255 aaPredicted RBP12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 GLI4P10075 376 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 LAMP1P11279 417 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 CYP4B1P13584 511 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 GRK2P25098 689 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 ELAVL4P26378 380 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 GDF1P27539 372 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 KIR3DL1P43629 444 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 SLC18A1P54219 525 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 NUP107P57740 925 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 C21orf58P58505 322 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 EMX2Q04743 252 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 CRYZQ08257 329 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 EFR3AQ14156 821 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 PTGR1Q14914 329 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 MLC1Q15049 377 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 ATP6AP1LQ52LC2 224 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 EIPR1Q53HC9 387 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 ANGPTL8Q6UXH0 198 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 SEM1Q6ZVN7 128 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 WDR53Q7Z5U6 358 aaPredicted RBP12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 LIX1Q8N485 282 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 OR7A2PQ8NGA2 310 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 PSMA8Q8TAA3 256 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 TLCD1Q96CP7 247 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 TMCO6Q96DC7 493 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 CENPHQ9H3R5 247 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 METTL7AQ9H8H3 244 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 KCNK9Q9NPC2 374 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 SIRT3Q9NTG7 399 aaPredicted RBP12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 ASIC5Q9NY37 505 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 SH3BP4Q9P0V3 963 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 B4GALT7Q9UBV7 327 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 RNF6Q9Y252 685 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 RAP2CQ9Y3L5 183 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 CCDC168Q8NDH2 2452 aa12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 INTS1Q8N201 2190 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-204ENST00000449062 CSMD1Q96PZ7 3565 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 ANKHD1Q8IWZ3 2542 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 TTC36A6NLP5 189 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 SCAMP2O15127 329 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 ZIC3O60481 467 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 WDR1O75083 606 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 SKAP2O75563 359 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 CBR3O75828 277 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 NKX2-2O95096 273 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 HSPA4LO95757 839 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 IGKV1D-16P01601 117 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 PRPS2P11908 318 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 PRF1P14222 555 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 BGNP21810 368 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 SLC1A6P48664 564 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 MANFP55145 182 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 SMU1Q2TAY7 513 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 ZNF585AQ6P3V2 769 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 ACAD11Q709F0 780 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 R3HCC1LQ7Z5L2 792 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 PLCZ1Q86YW0 608 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 CCDC71Q8IV32 467 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 ULK2Q8IYT8 1036 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 KRTCAP2Q8N6L1 136 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 OR1J4Q8NGS1 313 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 FAM110BQ8TC76 370 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 RND1Q92730 232 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 EFHD2Q96C19 240 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 SDCCAG3Q96C92 435 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 ZBED6CLQ96FA7 236 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 TREX2Q9BQ50 279 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 C1orf50Q9BV19 199 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 OSBPL11Q9BXB4 747 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 RTN4RQ9BZR6 473 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 AKTIPQ9H8T0 292 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 TMBIM4Q9HC24 238 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 CHST11Q9NPF2 352 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 SERHLQ9NQF3 203 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 DDX18Q9NVP1 670 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 CBLCQ9ULV8 474 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 SLC6A5Q9Y345 797 aa12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 MRPS18CQ9Y3D5 142 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 PHF3Q92576 2039 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-204ENST00000449062 GXYLT2A0PJZ3 443 aa12.81□□□□□ -0.36
RTFDC1-204ENST00000449062 C17orf51A8MQB3 221 aa12.81□□□□□ -0.36
RTFDC1-204ENST00000449062 HNRNPRO43390 633 aaKnown RBP12.81□□□□□ -0.36
RTFDC1-204ENST00000449062 TRAPPC6AO75865 159 aa12.81□□□□□ -0.36
RTFDC1-204ENST00000449062 TOXO94900 526 aa12.81□□□□□ -0.36
RTFDC1-204ENST00000449062 SNUPNO95149 360 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms