RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 PDLIM2Q96JY6 352 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 PIMREGQ9BSJ6 248 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 GRIP2Q9C0E4 1043 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 PIF1Q9H611 641 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 OBP2BQ9NPH6 170 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 CCDC167Q9P0B6 97 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 TCFL5Q9UL49 500 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 C9JVG2 144 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 PPM1DO15297 605 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 GALR3O60755 368 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 PIAS1O75925 651 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 INMTO95050 263 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 GBAP04062 536 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 PKLRP30613 574 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 OPRM1P35372 400 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 PIK3CBP42338 1070 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 RIDAP52758 137 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 AQP5P55064 265 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 CHRFAM7AQ494W8 412 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 FAM180BQ6P0A1 224 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZCCHC23Q6ZST2 131 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 FAM217AQ8IXS0 508 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 CLEC4FQ8N1N0 589 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 LRRC57Q8N9N7 239 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF775Q96BV0 537 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 DDIT4LQ96D03 193 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 NSMCE2Q96MF7 247 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 CENPMQ9NSP4 180 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ERGIC3Q9Y282 383 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 OARD1Q9Y530 152 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 AURKAO14965 403 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 PGM3O95394 542 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 LCA5LO95447 670 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ALBP02768 609 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 F7P08709 466 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 CCT3P49368 545 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 METAP1P53582 386 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 CARD18P57730 90 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 GCNT6Q5T4J0 391 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ALG1LQ6GMV1 187 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 KRT80Q6KB66 452 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZC3HC1Q86WB0 502 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 DTX3Q8N9I9 347 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 NOA1Q8NC60 698 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 C2CD4AQ8NCU7 369 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR1J2Q8NGS2 313 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 FAM110BQ8TC76 370 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 BRIX1Q8TDN6 353 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF480Q8WV37 535 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 CLPTM1LQ96KA5 538 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 SMIM14Q96QK8 99 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 C1orf21Q9H246 121 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 GIN1Q9NXP7 522 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 MBD2Q9UBB5 411 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 GALPQ9UBC7 116 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 PDE10AQ9Y233 779 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 HDAC3O15379 428 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLC9B1Q4ZJI4 515 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 PIANPQ8IYJ0 282 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 MFSD9Q8NBP5 474 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 PPP1R35Q8TAP8 253 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 HCAR1Q9BXC0 346 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 MARCH4Q9P2E8 410 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 RPS6KA6Q9UK32 745 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 PCDHGA7Q9Y5G6 932 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 MYH15Q9Y2K3 1946 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 MTCL1Q9Y4B5 1905 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 NPIPA5A0A0B4J1W7 369 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ANXA2P2A6NMY6 339 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 NPIPA7E9PJI5 369 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 NRG2O14511 850 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 TOR1AO14656 332 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 MRASO14807 208 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLC22A3O75751 556 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 GPR75O95800 540 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 NPIPA8P0DM63 369 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ACP1P24666 158 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 PSMB5P28074 263 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 CCR7P32248 378 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF140P52738 457 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 TIGD2Q4W5G0 525 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF550Q7Z398 422 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF227Q86WZ6 799 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 GNRHR2Q96P88 292 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 OCIAD1Q9NX40 245 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 TMED5Q9Y3A6 229 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR6B1O95007 311 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZGLP1P0C6A0 271 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 TCN1P20061 433 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 CERS1P27544 350 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 AOAHP28039 575 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 HMGCS1Q01581 520 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 BICRALQ6AI39 1079 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 TRMT10BQ6PF06 316 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 YRDCQ86U90 279 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 C11orf65Q8NCR3 313 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR5L1Q8NGL2 311 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR2Y1Q8NGV0 311 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 TWIST2Q8WVJ9 160 aa5.28□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLC44A1Q8WWI5 657 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms