RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 TMEM81Q6P7N7 255 aa2.84□□□□□ -1.95
PMS1-215ENST00000447232 STRA8Q7Z7C7 330 aa2.84□□□□□ -1.95
PMS1-215ENST00000447232 TBC1D1Q86TI0 1168 aaPredicted RBP2.84□□□□□ -1.95
PMS1-215ENST00000447232 ZNF567Q8N184 647 aa2.84□□□□□ -1.95
PMS1-215ENST00000447232 KRT222Q8N1A0 295 aa2.84□□□□□ -1.95
PMS1-215ENST00000447232 OR14L1PQ8NHC6 308 aa2.84□□□□□ -1.95
PMS1-215ENST00000447232 FAHD2AQ96GK7 314 aa2.84□□□□□ -1.95
PMS1-215ENST00000447232 FOPNLQ96NB1 174 aa2.84□□□□□ -1.95
PMS1-215ENST00000447232 APOL2Q9BQE5 337 aa2.84□□□□□ -1.95
PMS1-215ENST00000447232 TSSK1BQ9BXA7 367 aa2.84□□□□□ -1.95
PMS1-215ENST00000447232 VPS11Q9H270 941 aa2.84□□□□□ -1.95
PMS1-215ENST00000447232 ZDHHC2Q9UIJ5 367 aa2.84□□□□□ -1.95
PMS1-215ENST00000447232 AMFRQ9UKV5 643 aa2.84□□□□□ -1.95
PMS1-215ENST00000447232 TCAF1Q9Y4C2 921 aa2.84□□□□□ -1.95
PMS1-215ENST00000447232 PCDHGB5Q9Y5G0 923 aa2.84□□□□□ -1.95
PMS1-215ENST00000447232 TRAV20A0A0B4J274 112 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 ZNF487B1APH4 448 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 H0YC42 278 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 CDH16O75309 829 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 CBR3O75828 277 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 IFNA16P05015 189 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 MSNP26038 577 aaKnown RBP2.84□□□□□ -1.96
PMS1-215ENST00000447232 PTGDSP41222 190 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 MSH2P43246 934 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 HMGA2P52926 109 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 SUCLG1P53597 346 aaKnown RBP2.84□□□□□ -1.96
PMS1-215ENST00000447232 TPD52P55327 224 aaPredicted RBP2.84□□□□□ -1.96
PMS1-215ENST00000447232 B3GALT5-AS1P59052 145 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 POLR2FP61218 127 aaKnown RBP2.84□□□□□ -1.96
PMS1-215ENST00000447232 RUNX2Q13950 521 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 PON3Q15166 354 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.84□□□□□ -1.96
PMS1-215ENST00000447232 ZNF362Q5T0B9 420 aaPredicted RBP2.84□□□□□ -1.96
PMS1-215ENST00000447232 SAXO2Q658L1 398 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 FAM111BQ6SJ93 734 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 ANGPTL8Q6UXH0 198 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 NPNTQ6UXI9 565 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 CHMP1BQ7LBR1 199 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 CLNKQ7Z7G1 428 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 EXOC3L1Q86VI1 746 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 CCDC25Q86WR0 208 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 ZNF595Q8IYB9 648 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 WDSUB1Q8N9V3 476 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 KCTD6Q8NC69 237 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 NANPQ8TBE9 248 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 C22orf15Q8WYQ4 148 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 SLC25A28Q96A46 364 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 PYCR2Q96C36 320 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 SENP5Q96HI0 755 aaPredicted RBP2.84□□□□□ -1.96
PMS1-215ENST00000447232 GMPPAQ96IJ6 420 aaPredicted RBP2.84□□□□□ -1.96
PMS1-215ENST00000447232 RUNDC3BQ96NL0 473 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 DGAT2Q96PD7 388 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 FERMT1Q9BQL6 677 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 TRMOQ9BU70 441 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 PINK1Q9BXM7 581 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 AICDAQ9GZX7 198 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 RACGAP1Q9H0H5 632 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 ACTR8Q9H981 624 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 BEX1Q9HBH7 125 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 PLAC1Q9HBJ0 212 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 SERHLQ9NQF3 203 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 TAS2R10Q9NYW0 307 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 COPS7AQ9UBW8 275 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 RWDD2AQ9UIY3 292 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 HOOK1Q9UJC3 728 aaKnown RBP2.84□□□□□ -1.96
PMS1-215ENST00000447232 MID2Q9UJV3 735 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 MGAT4BQ9UQ53 548 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 EXO1Q9UQ84 846 aaKnown RBP2.84□□□□□ -1.96
PMS1-215ENST00000447232 ZNF148Q9UQR1 794 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 MRPS18CQ9Y3D5 142 aaKnown RBP2.84□□□□□ -1.96
PMS1-215ENST00000447232 WNK2Q9Y3S1 2297 aa2.84□□□□□ -1.96
PMS1-215ENST00000447232 CTAGE15A4D2H0 777 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 TMCO5BA8MYB1 307 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 CCDC188H7C350 402 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 K7EIL1 84 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 ZIC3O60481 467 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 CTNSO60931 367 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 PRKRAO75569 313 aaKnown RBP2.83□□□□□ -1.96
PMS1-215ENST00000447232 NGFP01138 241 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 FCGR2AP12318 317 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 IL32P24001 234 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 ATP5DP30049 168 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 SRD5A2P31213 254 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 KLK7P49862 253 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 RAB38P57729 211 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 RAB8AP61006 207 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 MORF4L2Q15014 288 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 EBPQ15125 230 aaKnown RBP2.83□□□□□ -1.96
PMS1-215ENST00000447232 SLC9A3R2Q15599 337 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 C2orf68Q2NKX9 166 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 FASTKD1Q53R41 847 aaKnown RBP2.83□□□□□ -1.96
PMS1-215ENST00000447232 RBMS3Q6XE24 437 aaKnown RBP2.83□□□□□ -1.96
PMS1-215ENST00000447232 TMEM64Q6YI46 380 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 CTAGE6Q86UF2 777 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 MAP7D3Q8IWC1 876 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 OR4K1Q8NGD4 311 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 OR51F2Q8NH61 342 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 GSDMBQ8TAX9 411 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 STYXQ8WUJ0 223 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 SKA2Q8WVK7 121 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms