RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 CHRDQ9H2X0 955 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 NUDT15Q9NV35 164 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 FAIMQ9NVQ4 179 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 HIF3AQ9Y2N7 669 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 C9JVG2 144 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 FAM72CH0Y354 149 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 SURF4O15260 269 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 OR7A10O76100 309 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 CSNK1A1P48729 337 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 CDH15P55291 814 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 FAM72AQ5TYM5 149 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 FAM72DQ6L9T8 149 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 PSAPL1Q6NUJ1 521 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 C1orf94Q6P1W5 598 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 FAM72BQ86X60 149 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 SORCS1Q8WY21 1168 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 PAAF1Q9BRP4 392 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 COQ3Q9NZJ6 369 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.09□□□□□ -1.11
PTPN3-204ENST00000446349 EIF1BO60739 113 aaKnown RBP8.09□□□□□ -1.11
PTPN3-204ENST00000446349 RGS9O75916 674 aaPredicted RBP8.09□□□□□ -1.11
PTPN3-204ENST00000446349 IFNA1P01562 189 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 GBAP04062 536 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 LHCGRP22888 699 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 MAGEA6P43360 314 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 GABARAPL2P60520 117 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 SCD5Q86SK9 330 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 EBF4Q9BQW3 602 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 CUTCQ9NTM9 273 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 LOC285095A0A1B0GVY8 99 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 SLC35E2BP0CK96 405 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 FAM189BP81408 668 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 EXOC3L2Q2M3D2 409 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 C19orf47Q8N9M1 422 aaKnown RBP8.09□□□□□ -1.11
PTPN3-204ENST00000446349 MFSD9Q8NBP5 474 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 OR7G1Q8NGA0 311 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 ASB17Q8WXJ9 295 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 ACOT13Q9NPJ3 140 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 POLE4Q9NR33 117 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 ERVK-18Q9QC07 812 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 LHX6Q9UPM6 363 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 GPR171O14626 319 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 AP1G1O43747 822 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 C1orf105O95561 183 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 MT-CO2P00403 227 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 ALDOBP05062 364 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 ETS2P15036 469 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 AK4P27144 223 aaPredicted RBP8.09□□□□□ -1.11
PTPN3-204ENST00000446349 SLC9A3P48764 834 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 RAB38P57729 211 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 CARTPTQ16568 116 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 DEFB133Q30KQ1 61 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 ZNF321PQ8N8H1 164 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 OR7G3Q8NG95 312 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 OR52E1Q8NGJ3 308 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 JPH3Q8WXH2 748 aaPredicted RBP8.09□□□□□ -1.11
PTPN3-204ENST00000446349 SLC41A3Q96GZ6 507 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 TXNDC15Q96J42 360 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 C19orf43Q9BQ61 176 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 LINC00597Q9H2U6 94 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 UBE2ZQ9H832 354 aaPredicted RBP8.09□□□□□ -1.11
PTPN3-204ENST00000446349 HEBP1Q9NRV9 189 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 C12orf71A8MTZ7 269 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 SDC3O75056 442 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 UCHL1P09936 223 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 NR0B1P51843 470 aaKnown RBP8.09□□□□□ -1.11
PTPN3-204ENST00000446349 NTHL1P78549 312 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 SCGB2B2Q4G0G5 96 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 CREB3L4Q8TEY5 395 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 FUBP1Q96AE4 644 aaKnown RBP8.09□□□□□ -1.11
PTPN3-204ENST00000446349 PAQR5Q9NXK6 330 aaPredicted RBP8.09□□□□□ -1.11
PTPN3-204ENST00000446349 PCTPQ9UKL6 214 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 PCDHB10Q9UN67 800 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 NAALAD2Q9Y3Q0 740 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 MYH14Q7Z406 1995 aaKnown RBP8.09□□□□□ -1.12
PTPN3-204ENST00000446349 TRIP11Q15643 1979 aa8.09□□□□□ -1.12
PTPN3-204ENST00000446349 FEZF1A0PJY2 475 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 DPPA5A6NC42 116 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 RFPL1O75677 317 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 SLC16A8O95907 504 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 MT-ND1P03886 318 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 CPOXP36551 454 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 PARS2Q7L3T8 475 aaKnown RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 RAB8BQ92930 207 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF471Q9BX82 626 aaPredicted RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 SDHAF2Q9NX18 166 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 DNMT3BQ9UBC3 853 aaKnown RBP8.08□□□□□ -1.12
PTPN3-204ENST00000446349 CLEC4EQ9ULY5 219 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 HCRTO43612 131 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 SCRG1O75711 98 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 PSKH1P11801 424 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 ANKDD1AQ495B1 522 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 EEF1A1P5Q5VTE0 462 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 EID2Q8N6I1 236 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 COQ8AQ8NI60 647 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 SPPL3Q8TCT6 385 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 C16orf58Q96GQ5 468 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 OR5B2Q96R09 309 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 MMP27Q9H306 513 aa8.08□□□□□ -1.12
PTPN3-204ENST00000446349 THSD1Q9NS62 852 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms