RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 ATCAYQ86WG3 371 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 HORMAD2Q8N7B1 307 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 FDCSPQ8NFU4 85 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 OR4N2Q8NGD1 307 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 OR8K3Q8NH51 312 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 CPT1CQ8TCG5 803 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 PSMF1Q92530 271 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 CDS1Q92903 461 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 ADIPOR1Q96A54 375 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 ROPN1LQ96C74 230 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 LCORQ96JN0 433 aaPredicted RBP15.9■□□□□ 0.14
LIME1-202ENST00000444951 ANKRD27Q96NW4 1050 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 OR7D2Q96RA2 312 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 IKZF5Q9H5V7 419 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 PIF1Q9H611 641 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 NANOGQ9H9S0 305 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 KCNE3Q9Y6H6 103 aa15.9■□□□□ 0.14
LIME1-202ENST00000444951 ESPL1Q14674 2120 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 GXYLT2A0PJZ3 443 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 EBAG9O00559 213 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 ITGA10O75578 1167 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 F10P00742 488 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 NPPAP01160 153 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 KRT16P08779 473 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 RNF224P0DH78 156 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 PPIBP23284 216 aaKnown RBP15.89■□□□□ 0.13
LIME1-202ENST00000444951 PPICP45877 212 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 PSME3P61289 254 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 PSG6Q00889 435 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 GABPB1Q06547 395 aaPredicted RBP15.89■□□□□ 0.13
LIME1-202ENST00000444951 ABHD17BQ5VST6 288 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 C6orf89Q6UWU4 347 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 RINLQ6ZS11 566 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 COX18Q8N8Q8 333 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 Q8NA96 180 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 OR52N2Q8NGI0 321 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 NUBPLQ8TB37 319 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 XAGE5Q8WWM1 108 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 RMND5BQ96G75 393 aaPredicted RBP15.89■□□□□ 0.13
LIME1-202ENST00000444951 SLC35A4Q96G79 324 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 LMF1Q96S06 567 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 LMF2Q9BU23 707 aaKnown RBP15.89■□□□□ 0.13
LIME1-202ENST00000444951 MFRPQ9BY79 579 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 RAD21L1Q9H4I0 556 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 Q9N2J8 555 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 MYOTQ9UBF9 498 aa15.89■□□□□ 0.13
LIME1-202ENST00000444951 GPR55Q9Y2T6 319 aaPredicted RBP15.89■□□□□ 0.13
LIME1-202ENST00000444951 FRG2CA6NGY1 282 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 CT45A8P0DMV1 189 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 CT45A9P0DMV2 189 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 DRD5P21918 477 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 SOX11P35716 441 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 MLF1P58340 268 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 DCAF7P61962 342 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 RGNQ15493 299 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 MEP1AQ16819 746 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 CT45A2Q5DJT8 189 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 ACER2Q5QJU3 275 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 AGAP7PQ5VUJ5 663 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 H3F3CQ6NXT2 135 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 ZCCHC12Q6PEW1 402 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 TAGAPQ8N103 731 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 ZNF441Q8N8Z8 693 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 ZNF354BQ96LW1 612 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 AGAP4Q96P64 663 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 BTBD9Q96Q07 612 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 ANKRD10Q9NXR5 420 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 STMN3Q9NZ72 180 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 TEKT2Q9UIF3 430 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 L3MBTL1Q9Y468 752 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 HIVEP3Q5T1R4 2406 aa15.88■□□□□ 0.13
LIME1-202ENST00000444951 ZNF354AO60765 605 aaPredicted RBP15.87■□□□□ 0.13
LIME1-202ENST00000444951 REM1O75628 298 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 NKX2-2O95096 273 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 NUDT7P0C024 238 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 SLC6A2P23975 617 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 MAN2A2P49641 1150 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 ANXA11P50995 505 aaKnown RBP15.87■□□□□ 0.13
LIME1-202ENST00000444951 SSR4P51571 173 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 SLC7A2P52569 658 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 MVDP53602 400 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 NRG3P56975 720 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 DSTNP60981 165 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 POU6F2P78424 691 aaPredicted RBP15.87■□□□□ 0.13
LIME1-202ENST00000444951 PLCXD2Q0VAA5 305 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 CYP51A1Q16850 503 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 PIGGQ5H8A4 983 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 CRB2Q5IJ48 1285 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 CCNJQ5T5M9 372 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 FIGNL1Q6PIW4 674 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 HACD2Q6Y1H2 254 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 CCDC121Q6ZUS5 278 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 OLIG3Q7RTU3 272 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 C16orf62Q7Z3J2 963 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 BEST3Q8N1M1 668 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 C10orf111Q8N326 155 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 TMEM156Q8N614 296 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 RBMXL3Q8N7X1 1067 aaKnown RBP15.87■□□□□ 0.13
LIME1-202ENST00000444951 GALNT11Q8NCW6 608 aa15.87■□□□□ 0.13
LIME1-202ENST00000444951 RBM15BQ8NDT2 890 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms