RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ADOQ96SZ5 270 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 YIPF4Q9BSR8 244 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 DOHHQ9BU89 302 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 PIGUQ9H490 435 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 RAD21L1Q9H4I0 556 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 OLAHQ9NV23 265 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 KLRF1Q9NZS2 232 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 B4GALT7Q9UBV7 327 aa12.98□□□□□ -0.33
SSBP3-208ENST00000444533 TLN1Q9Y490 2541 aaKnown RBP12.97□□□□□ -0.33
SSBP3-208ENST00000444533 ATRXP46100 2492 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 TMEM247A6NEH6 219 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 TFECO14948 347 aaPredicted RBP12.97□□□□□ -0.33
SSBP3-208ENST00000444533 NKX2-2O95096 273 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 AK1P00568 194 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 ZNF24P17028 368 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 ADSLP30566 484 aaPredicted RBP12.97□□□□□ -0.33
SSBP3-208ENST00000444533 LCN1P31025 176 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 PIGAP37287 484 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 MAGEA8P43361 318 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 SEC24CP53992 1094 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 MLLT10P55197 1068 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 GPR85P60893 370 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 PHC1P78364 1004 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 HPCAP84074 193 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 ALDH6A1Q02252 535 aaKnown RBP12.97□□□□□ -0.33
SSBP3-208ENST00000444533 SNTA1Q13424 505 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 GAB1Q13480 694 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 MMEL1Q495T6 779 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 NPSR1Q6W5P4 371 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 C16orf62Q7Z3J2 963 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 WDR53Q7Z5U6 358 aaPredicted RBP12.97□□□□□ -0.33
SSBP3-208ENST00000444533 SLC22A16Q86VW1 577 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 SULF2Q8IWU5 870 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 Q8NA96 180 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 SPPL2AQ8TCT8 520 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 GRHL3Q8TE85 626 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 TSPEARQ8WU66 669 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 EFHD2Q96C19 240 aaPredicted RBP12.97□□□□□ -0.33
SSBP3-208ENST00000444533 SNRNP40Q96DI7 357 aaKnown RBP12.97□□□□□ -0.33
SSBP3-208ENST00000444533 JSRP1Q96MG2 331 aaPredicted RBP12.97□□□□□ -0.33
SSBP3-208ENST00000444533 BTBD2Q9BX70 525 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 HES7Q9BYE0 225 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 EPN3Q9H201 632 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 SDHAF3Q9NRP4 125 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 LEF1Q9UJU2 399 aaPredicted RBP12.97□□□□□ -0.33
SSBP3-208ENST00000444533 NDUFAF1Q9Y375 327 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 COL6A6A6NMZ7 2263 aa12.97□□□□□ -0.33
SSBP3-208ENST00000444533 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 A0A1W2PP18 115 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 ANKRD33BA6NCL7 494 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 ZNF354AO60765 605 aaPredicted RBP12.96□□□□□ -0.33
SSBP3-208ENST00000444533 SCN2BO60939 215 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 NME6O75414 186 aaPredicted RBP12.96□□□□□ -0.33
SSBP3-208ENST00000444533 C1QL1O75973 258 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 IL33O95760 270 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 SNRPB2P08579 225 aaKnown RBP12.96□□□□□ -0.33
SSBP3-208ENST00000444533 ZCCHC18P0CG32 403 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 CCL3P10147 92 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 PPIBP23284 216 aaKnown RBP12.96□□□□□ -0.33
SSBP3-208ENST00000444533 TLE1Q04724 770 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 DUSP5Q16690 384 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 PRAMEF20Q5VT98 475 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 CGB2Q6NT52 195 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 SLC30A6Q6NXT4 461 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 LYPD8Q6UX82 237 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 DNAJC14Q6Y2X3 702 aaPredicted RBP12.96□□□□□ -0.33
SSBP3-208ENST00000444533 ZNF527Q8NB42 609 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 SLC16A11Q8NCK7 471 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 OR2M7Q8NG81 312 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 FAR1Q8WVX9 515 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 C10orf82Q8WW14 230 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 PIK3R3Q92569 461 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 NEURL3Q96EH8 262 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 GIMAP5Q96F15 307 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 SLC35A4Q96G79 324 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 C16orf58Q96GQ5 468 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 ZNF597Q96LX8 424 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 OSBPL11Q9BXB4 747 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 GPATCH2Q9NW75 528 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 THUMPD1Q9NXG2 353 aaKnown RBP12.96□□□□□ -0.33
SSBP3-208ENST00000444533 CORO2BQ9UQ03 480 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 CHCHD2Q9Y6H1 151 aaPredicted RBP12.96□□□□□ -0.33
SSBP3-208ENST00000444533 CAPN7Q9Y6W3 813 aa12.96□□□□□ -0.33
SSBP3-208ENST00000444533 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.96□□□□□ -0.33
SSBP3-208ENST00000444533 BOD1L1Q8NFC6 3051 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 CHD6Q8TD26 2715 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 PRAMEF25A6NGN4 478 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 G3V3Y1 287 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 SLC22A2O15244 555 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 ASNA1O43681 348 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 UGT2B11O75310 529 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 GSNP06396 782 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 ACP2P11117 423 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 ELAVL4P26378 380 aaKnown RBP12.95□□□□□ -0.34
SSBP3-208ENST00000444533 SAXO2Q658L1 398 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 ZNF227Q86WZ6 799 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 OR4N2Q8NGD1 307 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 XAGE5Q8WWM1 108 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 CDS1Q92903 461 aa12.95□□□□□ -0.34
SSBP3-208ENST00000444533 OR7D2Q96RA2 312 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms