RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 OR4A15Q8NGL6 344 aa16.01■□□□□ 0.15
SMARCAL1-209ENST00000444508 SFXN5Q8TD22 340 aa16.01■□□□□ 0.15
SMARCAL1-209ENST00000444508 SLC9A6Q92581 669 aa16.01■□□□□ 0.15
SMARCAL1-209ENST00000444508 JADE3Q92613 823 aa16.01■□□□□ 0.15
SMARCAL1-209ENST00000444508 EFHD2Q96C19 240 aaPredicted RBP16.01■□□□□ 0.15
SMARCAL1-209ENST00000444508 MARK4Q96L34 752 aa16.01■□□□□ 0.15
SMARCAL1-209ENST00000444508 CXorf36Q9H7Y0 433 aa16.01■□□□□ 0.15
SMARCAL1-209ENST00000444508 PROK2Q9HC23 129 aa16.01■□□□□ 0.15
SMARCAL1-209ENST00000444508 TCF7L2Q9NQB0 619 aa16.01■□□□□ 0.15
SMARCAL1-209ENST00000444508 RELNP78509 3460 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 GIMAP1-GIMAP5A0A087WTJ2 511 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 PRSS51A0A1B0GVH4 220 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 PRAMEF25A6NGN4 478 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 CDC40O60508 579 aaKnown RBP eCLIP16■□□□□ 0.15
SMARCAL1-209ENST00000444508 TSPAN2O60636 221 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 SLC22A3O75751 556 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 HMGN2P05204 90 aaKnown RBP16■□□□□ 0.15
SMARCAL1-209ENST00000444508 ALOX5P09917 674 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 IDH3AP50213 366 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 WNT3P56703 355 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 HBA1P69905 142 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 SNTA1Q13424 505 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 TP53BP2Q13625 1128 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 HYAL4Q2M3T9 481 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16■□□□□ 0.15
SMARCAL1-209ENST00000444508 CMPK2Q5EBM0 449 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 DESI1Q6ICB0 168 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 SLC30A6Q6NXT4 461 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 TMEM81Q6P7N7 255 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 PAOXQ6QHF9 649 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 CLECL1Q8IZS7 167 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 FAM26EQ8N5C1 309 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 TMEM251Q8N6I4 163 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 OR52N2Q8NGI0 321 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 FBXO30Q8TB52 745 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 GIMAP5Q96F15 307 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 CHMP6Q96FZ7 201 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 NODALQ96S42 347 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 OSBPL11Q9BXB4 747 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 DEFB127Q9H1M4 99 aa16■□□□□ 0.15
SMARCAL1-209ENST00000444508 FAM120CQ9NX05 1096 aaKnown RBP16■□□□□ 0.15
SMARCAL1-209ENST00000444508 FAF1Q9UNN5 650 aaPredicted RBP16■□□□□ 0.15
SMARCAL1-209ENST00000444508 TRIM3O75382 744 aaPredicted RBP15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 WISP2O76076 250 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 AGFG2O95081 481 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 NKX2-2O95096 273 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 CPSF4O95639 269 aaKnown RBP15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 KRT16P08779 473 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 ACP2P11117 423 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 MAGEA5P43359 124 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 RFX3P48380 749 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 CASP6P55212 293 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 STX1BP61266 288 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 LASP1Q14847 261 aaKnown RBP15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 ANKRD46Q86W74 232 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 MIER2Q8N344 545 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 COX18Q8N8Q8 333 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 OR5AK3PQ8NH89 298 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 HOXB13Q92826 284 aaPredicted RBP15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 RMND5BQ96G75 393 aaPredicted RBP15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 C16orf58Q96GQ5 468 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 TMEM41AQ96HV5 264 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 TEX37Q96LM6 180 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 YIPF4Q9BSR8 244 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 CCDC28BQ9BUN5 200 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 ZDHHC11Q9H8X9 412 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 SDR39U1Q9NRG7 319 aaPredicted RBP15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 ZIM2Q9NZV7 527 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 NINQ8N4C6 2090 aa15.99■□□□□ 0.15
SMARCAL1-209ENST00000444508 HIVEP3Q5T1R4 2406 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 USP9XQ93008 2570 aaPredicted RBP15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 NUP214P35658 2090 aaPredicted RBP15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 GXYLT2A0PJZ3 443 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 LRRC3CA6NJW4 275 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 SLC19A2O60779 497 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 EDF1O60869 148 aaKnown RBP15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 ICOSLGO75144 302 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 PDE9AO76083 593 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 IL33O95760 270 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 PGRP06401 933 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 ABOP16442 354 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 MAP3K8P41279 467 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 DGKQP52824 942 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 PHC1P78364 1004 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 HSF1Q00613 529 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 LRRC74AQ0VAA2 488 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 SLC10A1Q14973 349 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 ARHGAP11AQ6P4F7 1023 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 SLC16A11Q8NCK7 471 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 PIK3R3Q92569 461 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 OR52E6Q96RD3 313 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 STACQ99469 402 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 EBF4Q9BQW3 602 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 ACTRT3Q9BYD9 372 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 ZNF703Q9H7S9 590 aaPredicted RBP15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 QPCTLQ9NXS2 382 aa15.98■□□□□ 0.15
SMARCAL1-209ENST00000444508 TRGV8A0A0C4DH27 118 aa15.97■□□□□ 0.15
SMARCAL1-209ENST00000444508 RNF103-CHMP3A0A140T963 221 aa15.97■□□□□ 0.15
SMARCAL1-209ENST00000444508 C9JVG2 144 aa15.97■□□□□ 0.15
SMARCAL1-209ENST00000444508 SCN2BO60939 215 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms