RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 UBN2Q6ZU65 1347 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 ANKUB1A6NFN9 424 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 A8MUA0 341 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 TMEM114B3SHH9 223 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 CLDN34H7C241 214 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 AQP9O43315 295 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 AGFG2O95081 481 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 ELFN1P0C7U0 828 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 NKX2-5P52952 324 aaPredicted RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 CDK3Q00526 305 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 COL9A3Q14050 684 aaPredicted RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 TSC22D1Q15714 1073 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 CHI3L2Q15782 390 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 STX1AQ16623 288 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 MEP1AQ16819 746 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 QRICH1Q2TAL8 776 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 ACCSLQ4AC99 568 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 METTL21CQ5VZV1 264 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 LIPJQ5W064 366 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 RESP18Q5W5W9 173 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 OR4F3Q6IEY1 312 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 PLEKHA7Q6IQ23 1121 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 ZNF474Q6S9Z5 364 aaPredicted RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 C1orf52Q8N6N3 182 aaKnown RBP3.64□□□□□ -1.83
UBR3-206ENST00000444475 POC1AQ8NBT0 407 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 OR2D3Q8NGH3 330 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 OR51G2Q8NGK0 314 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 MAPKAP1Q9BPZ7 522 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 DUSP23Q9BVJ7 150 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 THSD1Q9NS62 852 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 MAT2BQ9NZL9 334 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 PSORS1C1Q9UIG5 152 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 FBXL3Q9UKT7 428 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 GSTK1Q9Y2Q3 226 aa3.64□□□□□ -1.83
UBR3-206ENST00000444475 KIF24Q5T7B8 1368 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 A0A1B0GVL5 298 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 CPED1A4D0V7 1026 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 CCT8L1PA6NM43 557 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 SYF2O95926 243 aaKnown RBP3.63□□□□□ -1.83
UBR3-206ENST00000444475 PEX11BO96011 259 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 GYPEP15421 78 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 ZNF43P17038 809 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 GLRA1P23415 457 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 NMBRP28336 390 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 PPIFP30405 207 aaKnown RBP3.63□□□□□ -1.83
UBR3-206ENST00000444475 LIPAP38571 399 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 ZNF75DP51815 510 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 LCN2P80188 198 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 TNFRSF9Q07011 255 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 DPYSL3Q14195 570 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 TAF1AQ15573 450 aaPredicted RBP3.63□□□□□ -1.83
UBR3-206ENST00000444475 DEFB115Q30KQ5 88 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 ZNF568Q3ZCX4 644 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 ACER2Q5QJU3 275 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 SEL1L2Q5TEA6 688 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 MARC1Q5VT66 337 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 LIPKQ5VXJ0 399 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 DENND2CQ68D51 928 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 UQCC3Q6UW78 93 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 IDO2Q6ZQW0 420 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 HS3ST5Q8IZT8 346 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 FGFRL1Q8N441 504 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 CCDC185Q8N715 623 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 CDRT4Q8N9R6 151 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 UBTD2Q8WUN7 234 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 FCAMRQ8WWV6 532 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 C16orf70Q9BSU1 422 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 C11orf84Q9BUA3 381 aaPredicted RBP3.63□□□□□ -1.83
UBR3-206ENST00000444475 DUSP16Q9BY84 665 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 ZFP64Q9NPA5 681 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 NDE1Q9NXR1 346 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 COPS7AQ9UBW8 275 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 FZD4Q9ULV1 537 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 POLDIP2Q9Y2S7 368 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 V9GYQ6 96 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 LRP6O75581 1613 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 BLMP54132 1417 aaPredicted RBP3.63□□□□□ -1.83
UBR3-206ENST00000444475 DIP2AQ14689 1571 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 PNPLA6Q8IY17 1366 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.63□□□□□ -1.83
UBR3-206ENST00000444475 EMSYQ7Z589 1322 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 CBX7O95931 251 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 NBEAP1P0C6P0 100 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 EPCAMP16422 314 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 NPR2P20594 1047 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 RBMS1P29558 406 aaKnown RBP3.63□□□□□ -1.83
UBR3-206ENST00000444475 TIMP3P35625 211 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 RAE1P78406 368 aaKnown RBP3.63□□□□□ -1.83
UBR3-206ENST00000444475 EGR3Q06889 387 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 SRSF1Q07955 248 aaKnown RBP eCLIP3.63□□□□□ -1.83
UBR3-206ENST00000444475 BSXQ3C1V8 233 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 SLC36A2Q495M3 483 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 SLC22A10Q63ZE4 541 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 C11orf63Q6NUN7 778 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 VWA1Q6PCB0 445 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 DPY19L3Q6ZPD9 716 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 SLCO4C1Q6ZQN7 724 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 P4HA3Q7Z4N8 544 aa3.63□□□□□ -1.83
UBR3-206ENST00000444475 CIR1Q86X95 450 aaPredicted RBP3.63□□□□□ -1.83
UBR3-206ENST00000444475 DMRTC2Q8IXT2 367 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms