RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 MRPS35P82673 323 aaKnown RBP12.92□□□□□ -0.34
HMGN1-208ENST00000443046 DR1Q01658 176 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 GTF2H2Q13888 395 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 EFR3AQ14156 821 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 PON3Q15166 354 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 CCNYL2Q5T2Q4 361 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 GTF2H2CQ6P1K8 395 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 METTL2BQ6P1Q9 378 aaKnown RBP12.92□□□□□ -0.34
HMGN1-208ENST00000443046 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.92□□□□□ -0.344e-11■■■■■ 27.5
HMGN1-208ENST00000443046 METTL4Q8N3J2 472 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 METTL25Q8N6Q8 603 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 AKAP1Q92667 903 aaKnown RBP eCLIP12.92□□□□□ -0.34
HMGN1-208ENST00000443046 CDKL2Q92772 493 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 NXNL1Q96CM4 212 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 CNRIP1Q96F85 164 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-208ENST00000443046 MRPL1Q9BYD6 325 aaKnown RBP12.92□□□□□ -0.34
HMGN1-208ENST00000443046 OR10A4Q9H209 315 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 YAE1D1Q9NRH1 226 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 WHRNQ9P202 907 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 TXNDC16Q9P2K2 825 aa12.92□□□□□ -0.34
HMGN1-208ENST00000443046 YLPM1P49750 1951 aaKnown RBP12.91□□□□□ -0.34
HMGN1-208ENST00000443046 CADP27708 2225 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 CCDC189A1A4V9 331 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 OR7A17O14581 309 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 ERAL1O75616 437 aaKnown RBP12.91□□□□□ -0.34
HMGN1-208ENST00000443046 AQP8O94778 261 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 CLDN9O95484 217 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 SOD3P08294 240 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 CRABP2P29373 138 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 SPRP35270 261 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-208ENST00000443046 PIK3CGP48736 1102 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 CLDN20P56880 219 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 CORO7P57737 925 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 PSPHP78330 225 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 LTB4RQ15722 352 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 PFKFB4Q16877 469 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 CHRFAM7AQ494W8 412 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 ZNF628Q5EBL2 1059 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 GRTP1Q5TC63 336 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 NPSR1Q6W5P4 371 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 LARP4Q71RC2 724 aaKnown RBP eCLIP12.91□□□□□ -0.341e-8■■■■■ 31.7
HMGN1-208ENST00000443046 PAGE2Q7Z2X7 111 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 TBC1D1Q86TI0 1168 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-208ENST00000443046 CENPLQ8N0S6 344 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-208ENST00000443046 SLC35F6Q8N357 371 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 OR2M3Q8NG83 312 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 OR6K3Q8NGY3 331 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 ZNF675Q8TD23 568 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 PYROXD1Q8WU10 500 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 TM4SF18Q96CE8 201 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 ERP27Q96DN0 273 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 VSTM2LQ96N03 204 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 DSN1Q9H410 356 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 AHSPQ9NZD4 102 aa12.91□□□□□ -0.34
HMGN1-208ENST00000443046 OR2M5A3KFT3 312 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 FADS1O60427 444 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 GUCY1B2O75343 617 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 BCAS2O75934 225 aaPredicted RBP12.9□□□□□ -0.34
HMGN1-208ENST00000443046 CTAGE8P0CG41 777 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 FCGR2AP12318 317 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 HK1P19367 917 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 DEKP35659 375 aaKnown RBP12.9□□□□□ -0.34
HMGN1-208ENST00000443046 MAPK12P53778 367 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 GALNT1Q10472 559 aaPredicted RBP12.9□□□□□ -0.34
HMGN1-208ENST00000443046 GANABQ14697 944 aaKnown RBP12.9□□□□□ -0.34
HMGN1-208ENST00000443046 SLMAPQ14BN4 828 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.9□□□□□ -0.34
HMGN1-208ENST00000443046 EXOC3L2Q2M3D2 409 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 GLYR1Q49A26 553 aaPredicted RBP12.9□□□□□ -0.34
HMGN1-208ENST00000443046 C10orf62Q5T681 223 aaPredicted RBP12.9□□□□□ -0.34
HMGN1-208ENST00000443046 FRG2Q64ET8 278 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 DNAJC14Q6Y2X3 702 aaPredicted RBP12.9□□□□□ -0.34
HMGN1-208ENST00000443046 RAPH1Q70E73 1250 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 COMMD6Q7Z4G1 85 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 CTAGE4Q8IX94 777 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 OR4K17Q8NGC6 315 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 RAB3IL1Q8TBN0 382 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 TRMT61AQ96FX7 289 aaKnown RBP12.9□□□□□ -0.34
HMGN1-208ENST00000443046 CDK15Q96Q40 435 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 FRG2BQ96QU4 278 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 SLCO5A1Q9H2Y9 848 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 ANKRA2Q9H9E1 313 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 ZBTB26Q9HCK0 441 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 PSME2Q9UL46 239 aa12.9□□□□□ -0.34
HMGN1-208ENST00000443046 ALPK2Q86TB3 2170 aa12.89□□□□□ -0.35
HMGN1-208ENST00000443046 A8MV72 311 aaPredicted RBP12.89□□□□□ -0.35
HMGN1-208ENST00000443046 SEC14L5O43304 696 aa12.89□□□□□ -0.35
HMGN1-208ENST00000443046 SS18L1O75177 396 aaPredicted RBP12.89□□□□□ -0.35
HMGN1-208ENST00000443046 SIX3O95343 332 aaPredicted RBP12.89□□□□□ -0.35
HMGN1-208ENST00000443046 IGHV4-39P01824 125 aa12.89□□□□□ -0.35
HMGN1-208ENST00000443046 FAM157CP0CG43 387 aa12.89□□□□□ -0.35
HMGN1-208ENST00000443046 ACVR1BP36896 505 aa12.89□□□□□ -0.35
HMGN1-208ENST00000443046 SLC6A8P48029 635 aa12.89□□□□□ -0.35
HMGN1-208ENST00000443046 TMEM44Q2T9K0 475 aa12.89□□□□□ -0.35
HMGN1-208ENST00000443046 RAET1LQ5VY80 246 aa12.89□□□□□ -0.35
HMGN1-208ENST00000443046 FAM180BQ6P0A1 224 aa12.89□□□□□ -0.35
HMGN1-208ENST00000443046 KLHL7Q8IXQ5 586 aa12.89□□□□□ -0.35
HMGN1-208ENST00000443046 OR4N2Q8NGD1 307 aa12.89□□□□□ -0.35
HMGN1-208ENST00000443046 OR52B6Q8NGF0 335 aa12.89□□□□□ -0.35
HMGN1-208ENST00000443046 KCTD4Q8WVF5 259 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms