RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 PRKAG1P54619 331 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 PHC1P78364 1004 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 GAB1Q13480 694 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 FAM174BQ3ZCQ3 159 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 SPANXN4Q5MJ08 99 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 PAOXQ6QHF9 649 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 CLEC18BQ6UXF7 455 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 PACS2Q86VP3 889 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 FAM109AQ8N4B1 249 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 CLEC18CQ8NCF0 446 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 OR4N2Q8NGD1 307 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 RNF138Q8WVD3 245 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 TMEM41AQ96HV5 264 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 TEX37Q96LM6 180 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 ZNF597Q96LX8 424 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 STACQ99469 402 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 ZFP64Q9NPA5 681 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 EQTNQ9NQ60 294 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 DUSP22Q9NRW4 184 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 PLSCR2Q9NRY7 297 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 BTNL2Q9UIR0 455 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 NPIPA1Q9UND3 350 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 SNX8Q9Y5X2 465 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 HIVEP3Q5T1R4 2406 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 G3V3Y1 287 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 HS6ST1O60243 411 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 SLC22A3O75751 556 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 KCNH1O95259 989 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 IL33O95760 270 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 HMGN2P05204 90 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 PGRP06401 933 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 ALOX5P09917 674 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 ELAVL4P26378 380 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 IL12AP29459 219 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 GABRA3P34903 492 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 RFC3P40938 356 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 AQP5P55064 265 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 PPIAP62937 165 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 EIF2S3LQ2VIR3 472 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 CMPK2Q5EBM0 449 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 CDC73Q6P1J9 531 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 SZRD1Q7Z422 152 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 CLECL1Q8IZS7 167 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 GOT1L1Q8NHS2 421 aaPredicted RBP13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 PRR7Q8TB68 274 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 GPR151Q8TDV0 419 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 RILPQ96NA2 401 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 CCDC115Q96NT0 180 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 NODALQ96S42 347 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 ADOQ96SZ5 270 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 OSBPL11Q9BXB4 747 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 ACTRT3Q9BYD9 372 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 CCDC134Q9H6E4 229 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 METTL7AQ9H8H3 244 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 GPATCH2Q9NW75 528 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 TMEM45AQ9NWC5 275 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 B4GALT7Q9UBV7 327 aa13.78□□□□□ -0.2
CSNK1E-210ENST00000442216 PRAMEF25A6NGN4 478 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 LRRC3CA6NJW4 275 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 UBR5O95071 2799 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 IGHG3P01860 377 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 STSP08842 583 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 ACP2P11117 423 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 UQCRC2P22695 453 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 LCN1P31025 176 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 PTGDSP41222 190 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 NME5P56597 212 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 STX1BP61266 288 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 TP53BP2Q13625 1128 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 SPDYE7PQ495Y7 208 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 Q6ZPB1 254 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 MSANTD1Q6ZTZ1 278 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 WDR53Q7Z5U6 358 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 MIER2Q8N344 545 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 TMEM251Q8N6I4 163 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 SLC16A11Q8NCK7 471 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 OR52N2Q8NGI0 321 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 OR4A15Q8NGL6 344 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 FAM110BQ8TC76 370 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 SLC9A6Q92581 669 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 DTNBP1Q96EV8 351 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 EBF4Q9BQW3 602 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 TSPAN10Q9H1Z9 355 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 PIGUQ9H490 435 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 ZNF703Q9H7S9 590 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 KLRF1Q9NZS2 232 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 FAF1Q9UNN5 650 aaPredicted RBP13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 ABCG2Q9UNQ0 655 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 ZNF835Q9Y2P0 537 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 PCDHGB3Q9Y5G1 929 aa13.77□□□□□ -0.21
CSNK1E-210ENST00000442216 GCN1Q92616 2671 aaKnown RBP13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 DUXAA6NLW8 204 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 ICOSLGO75144 302 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 WISP2O76076 250 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 CYP4B1P13584 511 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 MAGEA5P43359 124 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 MASP1P48740 699 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 KCNK10P57789 538 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 LASP1Q14847 261 aaKnown RBP13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 SLC10A1Q14973 349 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms