RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 RAB35Q15286 201 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 TGIF1Q15583 401 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 CDC37Q16543 378 aaPredicted RBP3.63□□□□□ -1.83
PFDN4-202ENST00000441080 QRICH1Q2TAL8 776 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 LDLRAP1Q5SW96 308 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 LGSNQ5TDP6 509 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 ZNF562Q6V9R5 426 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 HACD2Q6Y1H2 254 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 NET1Q7Z628 596 aaPredicted RBP3.63□□□□□ -1.83
PFDN4-202ENST00000441080 CCDC36Q8IYA8 594 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 OR8H1Q8NGG4 311 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 NCLNQ969V3 563 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 TADA1Q96BN2 335 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 SLC25A36Q96CQ1 311 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 C14orf79Q96F83 325 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 FAM111AQ96PZ2 611 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 HCAR1Q9BXC0 346 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 DEFB126Q9BYW3 111 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 RAB17Q9H0T7 212 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 NINJ2Q9NZG7 142 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 GHRLQ9UBU3 117 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 Q9UF83 564 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 PIN4Q9Y237 131 aaKnown RBP3.63□□□□□ -1.83
PFDN4-202ENST00000441080 GPRASP1Q5JY77 1395 aa3.63□□□□□ -1.83
PFDN4-202ENST00000441080 IGHV3-35A0A0C4DH35 117 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 E9PMD0 336 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 H3BTX0 84 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 SGK494L7N484 410 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 RASGRF2O14827 1237 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 ALOX15BO15296 676 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 DUSP14O95147 198 aaKnown RBP3.62□□□□□ -1.83
PFDN4-202ENST00000441080 SDC1P18827 310 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 TSPAN8P19075 237 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 ACVR1BP36896 505 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 XCR1P46094 333 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 HTR5AP47898 357 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 KRTAP10-3P60369 221 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 FUT7Q11130 342 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 IL18R1Q13478 541 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 SERTAD2Q14140 314 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 KARSQ15046 597 aaKnown RBP3.62□□□□□ -1.83
PFDN4-202ENST00000441080 RNF212Q495C1 297 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 TOR1AIP1Q5JTV8 583 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 MEDAGQ5VYS4 303 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 CNSTQ6PJW8 725 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 RBM43Q6ZSC3 357 aaKnown RBP3.62□□□□□ -1.83
PFDN4-202ENST00000441080 PARGQ86W56 976 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 ZNF525Q8N782 197 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 MINDY2Q8NBR6 621 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 FAM71CQ8NEG0 241 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 PAXXQ9BUH6 204 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 OPN3Q9H1Y3 402 aaPredicted RBP3.62□□□□□ -1.83
PFDN4-202ENST00000441080 ROPN1Q9HAT0 212 aaPredicted RBP3.62□□□□□ -1.83
PFDN4-202ENST00000441080 EXOSC3Q9NQT5 275 aaKnown RBP3.62□□□□□ -1.83
PFDN4-202ENST00000441080 ZNF275Q9NSD4 429 aaPredicted RBP3.62□□□□□ -1.83
PFDN4-202ENST00000441080 SOHLH2Q9NX45 425 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 P2RX2Q9UBL9 471 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 SLC2A6Q9UGQ3 507 aa3.62□□□□□ -1.83
PFDN4-202ENST00000441080 EXOSC1Q9Y3B2 195 aaKnown RBP3.62□□□□□ -1.83
PFDN4-202ENST00000441080 H0YL77 283 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 SLC17A2O00624 439 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 IGFBP1P08833 259 aaPredicted RBP3.61□□□□□ -1.83
PFDN4-202ENST00000441080 H2AFZP0C0S5 128 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 CHRNA3P32297 505 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 ASMTP46597 345 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 MEOX2P50222 304 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 RPS6P62753 249 aaKnown RBP3.61□□□□□ -1.83
PFDN4-202ENST00000441080 IGLV3-21P80748 117 aaPredicted RBP3.61□□□□□ -1.83
PFDN4-202ENST00000441080 PUDPQ08623 228 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 ASAH1Q13510 395 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 PAN3Q58A45 887 aaKnown RBP3.61□□□□□ -1.83
PFDN4-202ENST00000441080 SLX4IPQ5VYV7 408 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 IRGCQ6NXR0 463 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 MCOLN2Q8IZK6 566 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 ART4Q93070 314 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 CASD1Q96PB1 797 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 ELOVL4Q9GZR5 314 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 SLITRK2Q9H156 845 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 KAT8Q9H7Z6 458 aaKnown RBP3.61□□□□□ -1.83
PFDN4-202ENST00000441080 MIEF1Q9NQG6 463 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 ELOVL2Q9NXB9 296 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 DPM3Q9P2X0 92 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 HOOK1Q9UJC3 728 aaKnown RBP3.61□□□□□ -1.83
PFDN4-202ENST00000441080 ODF2LQ9ULJ1 636 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.61□□□□□ -1.83
PFDN4-202ENST00000441080 GRIN2DO15399 1336 aa3.61□□□□□ -1.83
PFDN4-202ENST00000441080 KLF18A0A0U1RQI7 1052 aa3.6□□□□□ -1.83
PFDN4-202ENST00000441080 ANXA4P09525 319 aaPredicted RBP3.6□□□□□ -1.83
PFDN4-202ENST00000441080 PRKAR2BP31323 418 aa3.6□□□□□ -1.83
PFDN4-202ENST00000441080 IL2RGP31785 369 aa3.6□□□□□ -1.83
PFDN4-202ENST00000441080 PRKCEQ02156 737 aa3.6□□□□□ -1.83
PFDN4-202ENST00000441080 CD47Q08722 323 aa3.6□□□□□ -1.83
PFDN4-202ENST00000441080 CAMK4Q16566 473 aa3.6□□□□□ -1.83
PFDN4-202ENST00000441080 PARP10Q53GL7 1025 aa3.6□□□□□ -1.83
PFDN4-202ENST00000441080 PRR30Q53SZ7 412 aaPredicted RBP3.6□□□□□ -1.83
PFDN4-202ENST00000441080 RAET1GQ6H3X3 334 aa3.6□□□□□ -1.83
PFDN4-202ENST00000441080 Q7L0L9 218 aa3.6□□□□□ -1.83
PFDN4-202ENST00000441080 C11orf53Q8IXP5 236 aa3.6□□□□□ -1.83
PFDN4-202ENST00000441080 CCDC26Q8TAB7 109 aa3.6□□□□□ -1.83
PFDN4-202ENST00000441080 CNOT6LQ96LI5 555 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms