RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ZNF559Q9BR84 538 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 ROPN1BQ9BZX4 212 aaPredicted RBP18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 PRDM14Q9GZV8 571 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 GLIPR2Q9H4G4 154 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 ROPN1Q9HAT0 212 aaPredicted RBP18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 SLC24A3Q9HC58 644 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 EQTNQ9NQ60 294 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 TAS2R7Q9NYW3 318 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 PPP4R1LQ9P1A2 415 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 SLC17A7Q9P2U7 560 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 MRTO4Q9UKD2 239 aaKnown RBP18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 C19orf53Q9UNZ5 99 aaPredicted RBP18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 CSMD1Q96PZ7 3565 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 H0Y3Z8 333 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 SCO2O43819 266 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 NPHS1O60500 1241 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 TSPAN2O60636 221 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 ACTL6AO96019 429 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 CHRNGP07510 517 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 DDX5P17844 614 aaKnown RBP18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 BMP5P22003 454 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 TCEA1P23193 301 aaKnown RBP18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 TACR1P25103 407 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 PTGDSP41222 190 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 PNLIPRP2P54317 469 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 WNT3P56703 355 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 TFF3Q07654 80 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 DECR1Q16698 335 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 NHSL2Q5HYW2 709 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 ANKRD26P1Q6NSI1 321 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 ENPP6Q6UWR7 440 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 OR4K17Q8NGC6 315 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 OR4N2Q8NGD1 307 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 CLHC1Q8NHS4 586 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 PPP1R14CQ8TAE6 165 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 EGLN2Q96KS0 407 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 DOCK7Q96N67 2140 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 C3orf14Q9HBI5 128 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 TAS2R10Q9NYW0 307 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 SH3BP4Q9P0V3 963 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 TMED5Q9Y3A6 229 aa18.09■□□□□ 0.49
SHROOM1-204ENST00000440118 TMEM233B4DJY2 109 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 EPPINO95925 133 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 CYP4B1P13584 511 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 SDC1P18827 310 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 GRK2P25098 689 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 UQCRC1P31930 480 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 EVI2BP34910 448 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 CLK3P49761 638 aaKnown RBP18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 PSMD4P55036 377 aaKnown RBP18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 SRYQ05066 204 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 PRSS53Q2L4Q9 553 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 ARL13AQ5H913 290 aaPredicted RBP18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 DCST1Q5T197 706 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 OR5M10Q6IEU7 315 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 AAGABQ6PD74 315 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 ZCCHC23Q6ZST2 131 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 TMEM200AQ86VY9 491 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 OR2L13Q8N349 312 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 WDSUB1Q8N9V3 476 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 OR2T11Q8NH01 316 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 CAVIN3Q969G5 261 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 ELP4Q96EB1 424 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 ZBED6CLQ96FA7 236 aaPredicted RBP18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 SFXN2Q96NB2 322 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 OR2B2Q9GZK3 357 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 REEP4Q9H6H4 257 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 MCCC2Q9HCC0 563 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 CBLCQ9ULV8 474 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 TRAF6Q9Y4K3 522 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 CCL27Q9Y4X3 112 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 DNAJC15Q9Y5T4 150 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 CCDC168Q8NDH2 2452 aa18.08■□□□□ 0.48
SHROOM1-204ENST00000440118 ANKHD1Q8IWZ3 2542 aaKnown RBP18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 TMEM114B3SHH9 223 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 UPK1AO00322 258 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 PLOD2O00469 737 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 PIP5K1BO14986 540 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 IGFBP2P18065 325 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 MAPK1P28482 360 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 SRD5A2P31213 254 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 HPCAL1P37235 193 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 ASMTP46597 345 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 PSG6Q00889 435 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 STX5Q13190 355 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 KIAA0040Q15053 153 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 KRT71Q3SY84 523 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 CYP27C1Q4G0S4 372 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 WDR93Q6P2C0 686 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 ZNF551Q7Z340 670 aaPredicted RBP18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 LIX1LQ8IVB5 337 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 DMRTC2Q8IXT2 367 aaPredicted RBP18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 TNIP2Q8NFZ5 429 aa18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 CIDECQ96AQ7 238 aaPredicted RBP18.07■□□□□ 0.48
SHROOM1-204ENST00000440118 KIAA1549Q9HCM3 1950 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 NPIPB8E9PQR5 432 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 LSM1O15116 133 aaKnown RBP18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 ZWINTO95229 277 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 KCNH1O95259 989 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms