RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 MAP2K3P46734 347 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 ARF5P84085 180 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 NFATC2Q13469 925 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 FBXO46Q6PJ61 603 aaPredicted RBP6.05□□□□□ -1.44
BDNF-211ENST00000439476 ARL9Q6T311 187 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 CHRDL2Q6WN34 429 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 DPY19L3Q6ZPD9 716 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 Q6ZSR9 355 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 SLC29A4Q7RTT9 530 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 CBARPQ8N350 705 aaPredicted RBP6.05□□□□□ -1.44
BDNF-211ENST00000439476 CELF5Q8N6W0 485 aaKnown RBP6.05□□□□□ -1.44
BDNF-211ENST00000439476 OR2T11Q8NH01 316 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 ARRDC2Q8TBH0 407 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 TFGQ92734 400 aaPredicted RBP6.05□□□□□ -1.44
BDNF-211ENST00000439476 G6PC3Q9BUM1 346 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 SLC6A16Q9GZN6 736 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 IGFLR1Q9H665 355 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 ABCB8Q9NUT2 735 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 C19orf25Q9UFG5 118 aaPredicted RBP6.05□□□□□ -1.44
BDNF-211ENST00000439476 UTS2RQ9UKP6 389 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 BTAF1O14981 1849 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 MROH6A6NGR9 719 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 CLDN24A6NM45 220 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 ERI3O43414 337 aaKnown RBP6.05□□□□□ -1.44
BDNF-211ENST00000439476 VEGFDO43915 354 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 LY86O95711 162 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 GBAP04062 536 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 BCHEP06276 602 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 SPHARQ15513 63 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 BTBD16Q32M84 506 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 OTUD1Q5VV17 481 aaPredicted RBP6.05□□□□□ -1.44
BDNF-211ENST00000439476 LIPKQ5VXJ0 399 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 PLPP4Q5VZY2 271 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 SLC22A10Q63ZE4 541 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 SMARCD3Q6STE5 483 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 COMTD1Q86VU5 262 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 CLECL1Q8IZS7 167 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 PARP16Q8N5Y8 322 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 RPLP0P6Q8NHW5 317 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 SUN3Q8TAQ9 357 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 STOML3Q8TAV4 291 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 TMEM234Q8WY98 164 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 ST8SIA4Q92187 359 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 FAM83CQ9BQN1 747 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 WRAP53Q9BUR4 548 aaKnown RBP6.05□□□□□ -1.44
BDNF-211ENST00000439476 XKR8Q9H6D3 395 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 UNKLQ9H9P5 680 aaKnown RBP6.05□□□□□ -1.44
BDNF-211ENST00000439476 WDR45Q9Y484 360 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 CLCA3PQ9Y6N3 262 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 EVPLQ92817 2033 aa6.05□□□□□ -1.44
BDNF-211ENST00000439476 GPR171O14626 319 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 TO15178 435 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 PROM1O43490 865 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 FZD6O60353 706 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 KDM4BO94953 1096 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 SCAF4O95104 1147 aaKnown RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 ATXN1LP0C7T5 689 aaKnown RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 HTR2AP28223 471 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 TIA1P31483 386 aaKnown RBP eCLIP6.04□□□□□ -1.44
BDNF-211ENST00000439476 HOXA1P49639 335 aaPredicted RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 CCR9P51686 369 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 HTRA4P83105 476 aaPredicted RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 USF2Q15853 346 aaPredicted RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 MANEAQ5SRI9 462 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 KIAA0319Q5VV43 1072 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 SLX4IPQ5VYV7 408 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 STEAP3Q658P3 488 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 CPZQ66K79 652 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 ZNF776Q68DI1 518 aaPredicted RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 C22orf39Q6P5X5 142 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 SEZ6L2Q6UXD5 910 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 ZNF619Q8N2I2 560 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 TRAM1L1Q8N609 369 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 OR2T33Q8NG76 320 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 FCAMRQ8WWV6 532 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 COQ8BQ96D53 544 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 BMFQ96LC9 184 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 HYLS1Q96M11 299 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 RBP7Q96R05 134 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 SNX18Q96RF0 628 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 RIOK2Q9BVS4 552 aaKnown RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 MVB12BQ9H7P6 319 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 RDH8Q9NYR8 311 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 UBQLN2Q9UHD9 624 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 NME7Q9Y5B8 376 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 IQCMA0A1B0GVH7 501 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 NAP1L6A6NFF2 107 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 WASH4PA8MWX3 477 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 ZNF623O75123 536 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 POP7O75817 140 aaKnown RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 CNMDO75829 334 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 C6orf47O95873 294 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 KLK1P06870 262 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 MTHFD2P13995 350 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 FSHRP23945 695 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 ADH7P40394 386 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 CASRP41180 1078 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 GPR143P51810 404 aa6.04□□□□□ -1.44
BDNF-211ENST00000439476 RIDAP52758 137 aaKnown RBP6.04□□□□□ -1.44
BDNF-211ENST00000439476 MRPS10P82664 201 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms