RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 CBARPQ8N350 705 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-203ENST00000434735 ENDOVQ8N8Q3 282 aaKnown RBP11.48□□□□□ -0.57
UBE3B-203ENST00000434735 AKAP1Q92667 903 aaKnown RBP eCLIP11.48□□□□□ -0.57
UBE3B-203ENST00000434735 RSC1A1Q92681 617 aa11.48□□□□□ -0.57
UBE3B-203ENST00000434735 BORCS5Q969J3 196 aa11.48□□□□□ -0.57
UBE3B-203ENST00000434735 C8orf44Q96CB5 159 aa11.48□□□□□ -0.57
UBE3B-203ENST00000434735 NSUN5Q96P11 429 aaKnown RBP11.48□□□□□ -0.57
UBE3B-203ENST00000434735 SEMA6CQ9H3T2 930 aa11.48□□□□□ -0.57
UBE3B-203ENST00000434735 NHSQ6T4R5 1651 aa11.48□□□□□ -0.57
UBE3B-203ENST00000434735 FOXE1O00358 373 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-203ENST00000434735 CCNKO75909 580 aa11.48□□□□□ -0.57
UBE3B-203ENST00000434735 KCNK5O95279 499 aa11.48□□□□□ -0.57
UBE3B-203ENST00000434735 MC3RP41968 323 aa11.48□□□□□ -0.57
UBE3B-203ENST00000434735 ZNF782Q6ZMW2 699 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-203ENST00000434735 IL4I1Q96RQ9 567 aa11.48□□□□□ -0.57
UBE3B-203ENST00000434735 LIPT1Q9Y234 373 aa11.48□□□□□ -0.57
UBE3B-203ENST00000434735 GABRR3A8MPY1 467 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 FMO6PO60774 539 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 CBFA2T3O75081 653 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 SOX14O95416 240 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 GLB1P16278 677 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 CLCA4Q14CN2 919 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 TMEM64Q6YI46 380 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 SLC46A3Q7Z3Q1 461 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 BTLAQ7Z6A9 289 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 GLIS1Q8NBF1 620 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 ZNF471Q9BX82 626 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-203ENST00000434735 CUEDC1Q9NWM3 386 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-203ENST00000434735 USP3Q9Y6I4 520 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 NUP98P52948 1817 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 FABP12A6NFH5 140 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 ARL6IP5O75915 188 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 PRDX6P30041 224 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 GRPRP30550 384 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 TRAM2Q15035 370 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 CBR4Q8N4T8 237 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 ANKK1Q8NFD2 765 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 OR5K1Q8NHB7 308 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 WFDC5Q8TCV5 224 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 FCGR1BQ92637 280 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 SGTBQ96EQ0 304 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 AMDHD1Q96NU7 426 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 HCAR1Q9BXC0 346 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 S100A14Q9HCY8 104 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 MED11Q9P086 117 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 DNAJB9Q9UBS3 223 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 ACSL6Q9UKU0 697 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 CCDC88AQ3V6T2 1871 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 F5H5K5 113 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 STK17BO94768 372 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 FMO3P31513 532 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 EMP3P54852 163 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 CDKN2DP55273 166 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 PPIAP62937 165 aaKnown RBP11.47□□□□□ -0.57
UBE3B-203ENST00000434735 CBLBQ13191 982 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 EIF5AL1Q6IS14 154 aaKnown RBP11.47□□□□□ -0.57
UBE3B-203ENST00000434735 SYCE2Q6PIF2 218 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 RFLNAQ6ZTI6 216 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 MMP21Q8N119 569 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 FAM156AQ8NDB6 213 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 THRSPQ92748 146 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 PEX13Q92968 403 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 SHISA4Q96DD7 197 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 PGAP3Q96FM1 320 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-203ENST00000434735 CCDC120Q96HB5 630 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 ZNF845Q96IR2 970 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-203ENST00000434735 DNTTIP1Q9H147 329 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 COMMD3Q9UBI1 195 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 LHX3Q9UBR4 397 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 GMEB1Q9Y692 573 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 ATP23Q9Y6H3 246 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 TMEM202A6NGA9 273 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 NRG2O14511 850 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-203ENST00000434735 MRPL3P09001 348 aaKnown RBP11.47□□□□□ -0.57
UBE3B-203ENST00000434735 RAP2AP10114 183 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 S1PR1P21453 382 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 THBS2P35442 1172 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 OR1E2P47887 323 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 CSNK1A1P48729 337 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 GNB2P62879 340 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 GAS6Q14393 721 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.47□□□□□ -0.57
UBE3B-203ENST00000434735 ZPBPQ9BS86 351 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 C1QTNF6Q9BXI9 259 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 CADM1Q9BY67 442 aaKnown RBP11.47□□□□□ -0.57
UBE3B-203ENST00000434735 POPDC3Q9HBV1 291 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 LRFN1Q9P244 771 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 ZNF221Q9UK13 617 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 ALS2Q96Q42 1657 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 NUMA1Q14980 2115 aa11.47□□□□□ -0.57
UBE3B-203ENST00000434735 A0A1B0GVC2 190 aa11.46□□□□□ -0.57
UBE3B-203ENST00000434735 PRLP01236 227 aa11.46□□□□□ -0.57
UBE3B-203ENST00000434735 HTR1AP08908 422 aa11.46□□□□□ -0.57
UBE3B-203ENST00000434735 CD1DP15813 335 aa11.46□□□□□ -0.57
UBE3B-203ENST00000434735 CD40LGP29965 261 aa11.46□□□□□ -0.57
UBE3B-203ENST00000434735 RAD52P43351 418 aa11.46□□□□□ -0.57
UBE3B-203ENST00000434735 LEPRP48357 1165 aaKnown RBP11.46□□□□□ -0.57
UBE3B-203ENST00000434735 GNG2P59768 71 aa11.46□□□□□ -0.57
UBE3B-203ENST00000434735 BLMHQ13867 455 aa11.46□□□□□ -0.57
UBE3B-203ENST00000434735 SYT14Q8NB59 555 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms