RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ATP6V1G1O75348 118 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 THBS1P07996 1170 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 IFI6P09912 130 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 ZNF888P0CJ79 500 aaPredicted RBP9.76□□□□□ -0.85
CD44-210ENST00000434472 SMIM10L1P0DMW3 83 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 ETV5P41161 510 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 OMPP47874 163 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 MTNR1AP48039 350 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 ETV1P50549 477 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 GAS1P54826 345 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 PSPHP78330 225 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 ARHGAP11BQ3KRB8 267 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 LIPKQ5VXJ0 399 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 ANKRD54Q6NXT1 300 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 MBOAT2Q6ZWT7 520 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 VN1R4Q7Z5H5 301 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 WDR53Q7Z5U6 358 aaPredicted RBP9.76□□□□□ -0.85
CD44-210ENST00000434472 BCDIN3DQ7Z5W3 292 aaKnown RBP9.76□□□□□ -0.85
CD44-210ENST00000434472 AP3S1Q92572 193 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 KAT2AQ92830 837 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 PMM1Q92871 262 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 SLC25A46Q96AG3 418 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 TM4SF19Q96DZ7 209 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 SLC41A3Q96GZ6 507 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 SMIM10Q96HG1 83 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 C10orf90Q96M02 699 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 KCTD7Q96MP8 289 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 WDR92Q96MX6 357 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 MCHR1Q99705 422 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 IGFLR1Q9H665 355 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 EGLN3Q9H6Z9 239 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 SYNDIG1Q9H7V2 258 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 ZNF443Q9Y2A4 671 aaPredicted RBP9.76□□□□□ -0.85
CD44-210ENST00000434472 PCDHGB2Q9Y5G2 931 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 SPIN1Q9Y657 262 aaPredicted RBP9.76□□□□□ -0.85
CD44-210ENST00000434472 CCDC88CQ9P219 2028 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 NUMA1Q14980 2115 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 TNFRSF10CO14798 259 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 SLC31A1O15431 190 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 RGS5O15539 181 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 KCNK2O95069 426 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 CDRT1O95170 752 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 GAAP10253 952 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 HOXB3P14651 431 aaPredicted RBP9.75□□□□□ -0.85
CD44-210ENST00000434472 SLC9A3P48764 834 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 DSG2Q14126 1118 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 DOC2BQ14184 412 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 TMEM196Q5HYL7 178 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 DESI1Q6ICB0 168 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 ENPP7Q6UWV6 458 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 CCBE1Q6UXH8 406 aaPredicted RBP9.75□□□□□ -0.85
CD44-210ENST00000434472 USP53Q70EK8 1073 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 ABHD13Q7L211 337 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 GDPD3Q7L5L3 318 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 TRIM73Q86UV7 250 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 RANBP3LQ86VV4 465 aaPredicted RBP9.75□□□□□ -0.85
CD44-210ENST00000434472 OR8H2Q8N162 312 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 OR2L13Q8N349 312 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 FAM181AQ8N9Y4 354 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 ZFPM2Q8WW38 1151 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 OR1E3Q8WZA6 343 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 SLC9A6Q92581 669 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 KIAA1143Q96AT1 154 aaPredicted RBP9.75□□□□□ -0.85
CD44-210ENST00000434472 FAM46AQ96IP4 442 aaKnown RBP9.75□□□□□ -0.85
CD44-210ENST00000434472 MSLNLQ96KJ4 702 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 RIPOR3Q96MK2 946 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 BARHL1Q9BZE3 327 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 PLA2G12AQ9BZM1 189 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 TWSG1Q9GZX9 223 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 MKRN2Q9H000 416 aaKnown RBP9.75□□□□□ -0.85
CD44-210ENST00000434472 MOV10Q9HCE1 1003 aaKnown RBP9.75□□□□□ -0.85
CD44-210ENST00000434472 LYRM4Q9HD34 91 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 CTPS2Q9NRF8 586 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 H2AFY2Q9P0M6 372 aaPredicted RBP9.75□□□□□ -0.85
CD44-210ENST00000434472 TBC1D29Q9UFV1 150 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 EXOGQ9Y2C4 368 aaKnown RBP9.75□□□□□ -0.85
CD44-210ENST00000434472 WDR45Q9Y484 360 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 CDH10Q9Y6N8 788 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 SPACA6W5XKT8 324 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 HEATR5BQ9P2D3 2071 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 MYO7AQ13402 2215 aa9.75□□□□□ -0.85
CD44-210ENST00000434472 BTN3A3O00478 584 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 KLF4O43474 513 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 DYRK3O43781 588 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 AK1P00568 194 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 DBIP07108 87 aaKnown RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 LAMP2P13473 410 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 HOXB2P14652 356 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 SPNP16150 400 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 MAT2AP31153 395 aaKnown RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 GABRA5P31644 462 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 PTGER1P34995 402 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 MAGEA10P43363 369 aaPredicted RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 AVPR1BP47901 424 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 PDX1P52945 283 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 CDH11P55287 796 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 TPTEP56180 551 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 ACSM1Q08AH1 577 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 DUSP8Q13202 625 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 LTB4RQ15722 352 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms