RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 ZNF431Q8TF32 576 aaPredicted RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 SETD7Q8WTS6 366 aaKnown RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 RNFT2Q96EX2 444 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 REEP6Q96HR9 211 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 RDH12Q96NR8 316 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 KCNK16Q96T55 309 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 DOK1Q99704 481 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ARHGDIGQ99819 225 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 STRADBQ9C0K7 418 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ALG9Q9H6U8 611 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 SEC31BQ9NQW1 1179 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF222Q9UK12 451 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 RPL26L1Q9UNX3 145 aaKnown RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 NPTNQ9Y639 398 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 NPATQ14207 1427 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 FHOD3Q2V2M9 1422 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 PP2D1A8MPX8 630 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 KCNU1A8MYU2 1149 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 BHLHE40O14503 412 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 RAB29O14966 203 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 KDELR3O43731 214 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 SLC19A2O60779 497 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 TGFB1P01137 390 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 FTH1P02794 183 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 NR3C1P04150 777 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 CRYGCP07315 174 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ANXA4P09525 319 aaPredicted RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ZP3P21754 424 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 GRM5P41594 1212 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ECI1P42126 302 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 BLKP51451 505 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 SLC25A3Q00325 362 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 CDK6Q00534 326 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 GRAPQ13588 217 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 IL10RAQ13651 578 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF284Q2VY69 593 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 C3orf36Q3SXR2 165 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 PDZD11Q5EBL8 140 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 RTL6Q6ICC9 239 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 DPY19L2P2Q6ZN68 376 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 MRPL21Q7Z2W9 205 aaKnown RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ADIPOR2Q86V24 386 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 PROSER1Q86XN7 944 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 C1orf87Q8N0U7 546 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ARRDC1Q8N5I2 433 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 CHST14Q8NCH0 376 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 EEF1AKMT1Q8WVE0 214 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 PIGBQ92521 554 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 MMABQ96EY8 250 aaPredicted RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 POM121L2Q96KW2 1035 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 C4orf36Q96KX1 117 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF354BQ96LW1 612 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 TOX2Q96NM4 488 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 G6PC3Q9BUM1 346 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 C20orf24Q9BUV8 137 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ANKHQ9HCJ1 492 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 MRM2Q9UI43 246 aaKnown RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 LIPGQ9Y5X9 500 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 IQCMA0A1B0GVH7 501 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 NKX6-3A6NJ46 265 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 E7ENX8 843 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 DUX1O43812 170 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 PRICKLE3O43900 615 aaPredicted RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 SCGB1D1O95968 90 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 PTPRAP18433 802 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 SLC2A5P22732 501 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ITGA3P26006 1051 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 C21orf33P30042 268 aaPredicted RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 PBX1P40424 430 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 NR0B1P51843 470 aaKnown RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 RPL23AP62750 156 aaKnown RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 FAM3AP98173 230 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 CDC42EP1Q00587 391 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 MC2RQ01718 297 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ITPK1Q13572 414 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 PTPRCAPQ14761 206 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 SURF2Q15527 256 aaPredicted RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ACKR1Q16570 336 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 GPR33Q49SQ1 333 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 DHRS7BQ6IAN0 325 aaPredicted RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 CASP12Q6UXS9 341 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF562Q6V9R5 426 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ZFAND4Q86XD8 727 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 AQP12AQ8IXF9 295 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 CENPLQ8N0S6 344 aaPredicted RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 OR4A16Q8NH70 328 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF480Q8WV37 535 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 DNASE2BQ8WZ79 361 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 R3HDM4Q96D70 268 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 COL21A1Q96P44 957 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 DUX5Q96PT3 197 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 PANX3Q96QZ0 392 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 GFM1Q96RP9 751 aaKnown RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 FN3KQ9H479 309 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 TDRD3Q9H7E2 651 aaKnown RBP5.07□□□□□ -1.6
PTPN4-203ENST00000430976 LPAR2Q9HBW0 351 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 INSL6Q9Y581 213 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 HSPE1-MOB4S4R3N1 261 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 FRMPD1Q5SYB0 1578 aa5.07□□□□□ -1.6
PTPN4-203ENST00000430976 A0A1B0GTH6 734 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms