RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 PIK3R3Q92569 461 aa13.33□□□□□ -0.28
CALD1-207ENST00000430085 HDAC2Q92769 488 aaKnown RBP13.33□□□□□ -0.28
CALD1-207ENST00000430085 ZG16BQ96DA0 208 aa13.33□□□□□ -0.28
CALD1-207ENST00000430085 PELOQ9BRX2 385 aaKnown RBP13.33□□□□□ -0.28
CALD1-207ENST00000430085 CAPN10Q9HC96 672 aa13.33□□□□□ -0.28
CALD1-207ENST00000430085 DHCR7Q9UBM7 475 aaKnown RBP13.33□□□□□ -0.28
CALD1-207ENST00000430085 ACAD8Q9UKU7 415 aa13.33□□□□□ -0.28
CALD1-207ENST00000430085 ATXN7L1Q9ULK2 861 aaPredicted RBP13.33□□□□□ -0.28
CALD1-207ENST00000430085 FAAHO00519 579 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 SEMA7AO75326 666 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 CER1O95813 267 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 EPPINO95925 133 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 IL7RP16871 459 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 EEF1B2P24534 225 aaKnown RBP13.32□□□□□ -0.28
CALD1-207ENST00000430085 GABRA3P34903 492 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 OR1D4P47884 311 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 ISL1P61371 349 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 CD47Q08722 323 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 PIN1Q13526 163 aaPredicted RBP13.32□□□□□ -0.28
CALD1-207ENST00000430085 GPR68Q15743 365 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 MEP1AQ16819 746 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 EXOSC6Q5RKV6 272 aaKnown RBP13.32□□□□□ -0.28
CALD1-207ENST00000430085 PERM1Q5SV97 790 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 DHRS4L2Q6PKH6 230 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 NAT6Q93015 286 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 DHRS1Q96LJ7 313 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 NIPSNAP1Q9BPW8 284 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 ZNF350Q9GZX5 532 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 SYNDIG1Q9H7V2 258 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 FGF21Q9NSA1 209 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 NDUFA13Q9P0J0 144 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 ENOPH1Q9UHY7 261 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 BLOC1S6Q9UL45 172 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 NDRG4Q9ULP0 352 aaKnown RBP13.32□□□□□ -0.28
CALD1-207ENST00000430085 A4GNTQ9UNA3 340 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 HSPE1-MOB4S4R3N1 261 aa13.32□□□□□ -0.28
CALD1-207ENST00000430085 LY6G6EA0A0G2JKS1 128 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 TRBV4-1A0A0J9YWV2 114 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 SMIM31A0A1B0GVY4 71 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 OR2W5A6NFC9 320 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 TRIM64A6NGJ6 449 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 PATE3B3GLJ2 98 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 CPNE6O95741 557 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 OXSR1O95747 527 aaPredicted RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 RPLP0P05388 317 aaKnown RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 POU2F1P14859 743 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 FUT4P22083 530 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 ELAVL4P26378 380 aaKnown RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 PI4KAP42356 2102 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 PGDP52209 483 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 RPP38P78345 283 aaKnown RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 POU6F2P78424 691 aaPredicted RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 BIKQ13323 160 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 TOP3AQ13472 1001 aaPredicted RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 ZNF267Q14586 743 aaPredicted RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 CTU2Q2VPK5 515 aaKnown RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 TRIM61Q5EBN2 209 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 C6orf141Q5SZD1 244 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 MFSD4BQ5TF39 518 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 YOD1Q5VVQ6 348 aaPredicted RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 ZNF619Q8N2I2 560 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 GTPBP3Q969Y2 492 aaKnown RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 PRRC1Q96M27 445 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 ZNF578Q96N58 590 aaPredicted RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 OR1F2PQ96R84 312 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 ARHGDIGQ99819 225 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 CNPPD1Q9BV87 410 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 IRF2BPLQ9H1B7 796 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 SLC6A14Q9UN76 642 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 ZNF443Q9Y2A4 671 aaPredicted RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 U3KQA8 63 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 CABIN1Q9Y6J0 2220 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 PRAMEF2O60811 474 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 TNNI3P19429 210 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 S1PR1P21453 382 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 FBLP22087 321 aaKnown RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 CBLP22681 906 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 EPHA2P29317 976 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 SSTR4P31391 388 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 IFNA8P32881 189 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 HLCSP50747 726 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 TAS2R41P59536 307 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 CCL7P80098 99 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 DUSP8Q13202 625 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 SQSTM1Q13501 440 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 NADK2Q4G0N4 442 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 EIPR1Q53HC9 387 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 PRAMEF17Q5VTA0 474 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 FOXB2Q5VYV0 432 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 TSPYL5Q86VY4 417 aaPredicted RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 NR4A3Q92570 626 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 ZNF501Q96CX3 271 aaPredicted RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 PTCHD1Q96NR3 888 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 DPYSL5Q9BPU6 564 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 FOLH1BQ9HBA9 442 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 ZNF304Q9HCX3 659 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 MMACHCQ9Y4U1 282 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 HEMK1Q9Y5R4 338 aaPredicted RBP13.31□□□□□ -0.28
CALD1-207ENST00000430085 SPTBP11277 2137 aa13.31□□□□□ -0.28
CALD1-207ENST00000430085 A0A1W2PRQ8 180 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms