RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 PRAMEF33A0A0G2JMD5 474 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 PRAMEF10O60809 474 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 S100A6P06703 90 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 POU3F3P20264 500 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-207ENST00000429896 ARL3P36405 182 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 MLLT10P55197 1068 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 TMEM214Q6NUQ4 689 aaKnown RBP12.17□□□□□ -0.46
PTCH1-207ENST00000429896 TMEM203Q969S6 136 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 PCDHAC1Q9H158 963 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 COMMD3Q9UBI1 195 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 SLC7A8Q9UHI5 535 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 ACSL6Q9UKU0 697 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 HEMK1Q9Y5R4 338 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-207ENST00000429896 AQP12BA6NM10 295 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 RNASET2O00584 256 aaKnown RBP12.17□□□□□ -0.46
PTCH1-207ENST00000429896 H1F0P07305 194 aaKnown RBP12.17□□□□□ -0.46
PTCH1-207ENST00000429896 TRIM23P36406 574 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 CYBRD1Q53TN4 286 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 RAET1LQ5VY80 246 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 BEND4Q6ZU67 534 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 AQP12AQ8IXF9 295 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 AIFM1O95831 613 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 CYB5AP00167 134 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 HSD11B1P28845 292 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 NANOGP8Q6NSW7 305 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 GUSBP11Q6P575 273 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 TOR1AIP2Q8NFQ8 470 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 OR52R1Q8NGF1 315 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 OR2I1PQ8NGU4 316 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 OR52P1PQ8NH57 321 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 CCDC106Q9BWC9 280 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 NANOGQ9H9S0 305 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 DNAJB9Q9UBS3 223 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 BTNL2Q9UIR0 455 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 TNFSF14O43557 240 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 ZNF20P17024 532 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 SDC2P34741 201 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 MESP2Q0VG99 397 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 KLHL26Q53HC5 615 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 ZNF440Q8IYI8 595 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 PNPLA2Q96AD5 504 aa12.17□□□□□ -0.46
PTCH1-207ENST00000429896 AURKBQ96GD4 344 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-207ENST00000429896 MT-CO3P00414 261 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 SCGB2B2Q4G0G5 96 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 HMGN2P46Q86SG4 172 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 CENPNQ96H22 339 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-207ENST00000429896 MMACHCQ9Y4U1 282 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 ZNF821O75541 412 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-207ENST00000429896 PRKD3O94806 890 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 BPNT1O95861 308 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 RPS3AP61247 264 aaKnown RBP12.16□□□□□ -0.46
PTCH1-207ENST00000429896 VBP1P61758 197 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 CRTC2Q53ET0 693 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-207ENST00000429896 RNF220Q5VTB9 566 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 PROKR2Q8NFJ6 384 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 SORT1Q99523 831 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 MNTQ99583 582 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 ZNF717Q9BY31 904 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-207ENST00000429896 TIGARQ9NQ88 270 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 TMEM45AQ9NWC5 275 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 VNN3Q9NY84 501 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 MYO7AQ13402 2215 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 ANGPTL1O95841 491 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 RENP00797 406 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 IFI30P13284 250 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 CD47Q08722 323 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 PPP1R8Q12972 351 aaKnown RBP12.16□□□□□ -0.46
PTCH1-207ENST00000429896 ZNF419Q96HQ0 510 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-207ENST00000429896 NPLQ9BXD5 320 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-207ENST00000429896 AMBNQ9NP70 447 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 NPIPA5E9PKD4 350 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 PEX2P28328 305 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 E2F2Q14209 437 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 ABCA11PQ4W5N1 156 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 GALNT10Q86SR1 603 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 TMED9Q9BVK6 235 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 TIMMDC1Q9NPL8 285 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 NPIPA1Q9UND3 350 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 YARS2Q9Y2Z4 477 aaKnown RBP12.16□□□□□ -0.46
PTCH1-207ENST00000429896 IRGMA1A4Y4 181 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 TSFMP43897 325 aaKnown RBP12.16□□□□□ -0.46
PTCH1-207ENST00000429896 GFERP55789 205 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 TRA2AQ13595 282 aaKnown RBP eCLIP12.16□□□□□ -0.46
PTCH1-207ENST00000429896 SF3A2Q15428 464 aaKnown RBP12.16□□□□□ -0.46
PTCH1-207ENST00000429896 CROCCP3Q8IVE0 287 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 LRRC46Q96FV0 321 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 PYURFQ96I23 114 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 TAAR9Q96RI9 348 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 MCHR1Q99705 422 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 TCF7L1Q9HCS4 588 aa12.16□□□□□ -0.46
PTCH1-207ENST00000429896 ST6GAL1P15907 406 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 SFT2D3Q587I9 215 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 CBR4Q8N4T8 237 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 ZNF740Q8NDX6 193 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 OR8H1Q8NGG4 311 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 KCMF1Q9P0J7 381 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 MGAT4AQ9UM21 535 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 THRBP10828 461 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 MAGEA12P43365 314 aa12.15□□□□□ -0.46
PTCH1-207ENST00000429896 GALNT6Q8NCL4 622 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms