RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 SLC28A3Q9HAS3 691 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 MRPS30Q9NP92 439 aaKnown RBP12.95□□□□□ -0.34
SGMS1-203ENST00000429490 OR1A2Q9Y585 309 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.95□□□□□ -0.34
SGMS1-203ENST00000429490 FFAR1O14842 300 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 SLC31A1O15431 190 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 SYPP08247 313 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 GKN3PP0CG01 181 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 ANXA3P12429 323 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 STXBP1P61764 594 aaKnown RBP12.95□□□□□ -0.34
SGMS1-203ENST00000429490 RRAS2P62070 204 aaPredicted RBP12.95□□□□□ -0.34
SGMS1-203ENST00000429490 TSPAN5P62079 268 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 CCNJQ5T5M9 372 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 FAM109AQ8N4B1 249 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 NUP43Q8NFH3 380 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 GNPDA2Q8TDQ7 276 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 TBC1D20Q96BZ9 403 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 GINS4Q9BRT9 223 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 NDC1Q9BTX1 674 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 BTBD2Q9BX70 525 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 NDUFB11Q9NX14 153 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 SESN1Q9Y6P5 492 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 HMGN1P05114 100 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 ETV6P41212 452 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 KCNJ5P48544 419 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 PRLHRP49683 370 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 METAP1P53582 386 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 SNTB2Q13425 540 aaKnown RBP12.94□□□□□ -0.34
SGMS1-203ENST00000429490 ARTNQ5T4W7 220 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 FRRS1Q6ZNA5 592 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 GPR32P1Q8NGA4 272 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 OR4C15Q8NGM1 316 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 OSTF1Q92882 214 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 UCN3Q969E3 161 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 CD180Q99467 661 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 RAD9AQ99638 391 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 NPAP1Q9NZP6 1156 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 HS3ST2Q9Y278 367 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 PSME4Q14997 1843 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 OR52A4PA6NMU1 304 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 ACP2P11117 423 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 GRPRP30550 384 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 CD79BP40259 229 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 RAB33AQ14088 237 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 EFR3AQ14156 821 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 TOR1AIP1Q5JTV8 583 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 PDXPQ96GD0 296 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 DIMT1Q9UNQ2 313 aaKnown RBP12.94□□□□□ -0.34
SGMS1-203ENST00000429490 MYO16Q9Y6X6 1858 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 SCN3AQ9NY46 2000 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 RAB40BQ12829 278 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 ASAH1Q13510 395 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 NDUFAF6Q330K2 333 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 GRASPQ7Z6J2 395 aaPredicted RBP12.94□□□□□ -0.34
SGMS1-203ENST00000429490 LRRTM4Q86VH4 590 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 CLDN22Q8N7P3 220 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 BBS1Q8NFJ9 593 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 OR9A2Q8NGT5 310 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 TRMT10AQ8TBZ6 339 aaKnown RBP12.94□□□□□ -0.34
SGMS1-203ENST00000429490 ALG8Q9BVK2 526 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 TTYH1Q9H313 450 aaPredicted RBP12.94□□□□□ -0.34
SGMS1-203ENST00000429490 NFKBIL1Q9UBC1 381 aaPredicted RBP12.94□□□□□ -0.34
SGMS1-203ENST00000429490 V9GYH0 126 aa12.94□□□□□ -0.34
SGMS1-203ENST00000429490 TAS2R38P59533 333 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 GALK2Q01415 458 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 ZNF33BQ06732 778 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 HYAL4Q2M3T9 481 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 ASTLQ6HA08 431 aaPredicted RBP12.93□□□□□ -0.34
SGMS1-203ENST00000429490 POMZP3Q6PJE2 187 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 ESPNLQ6ZVH7 1005 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 PRICKLE2Q7Z3G6 844 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 C1orf216Q8TAB5 229 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 TMEM163Q8TC26 289 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 CHAC2Q8WUX2 184 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 ZFPM2Q8WW38 1151 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 SGIP1Q9BQI5 828 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 SLAMF7Q9NQ25 335 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 C12orf4Q9NQ89 552 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 MARK1Q9P0L2 795 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 TDRD15B5MCY1 1934 aaKnown RBP12.93□□□□□ -0.34
SGMS1-203ENST00000429490 A0A087WUU8 490 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 A8MUA0 341 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 HMGN4O00479 90 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 SLC9A3R1O14745 358 aaPredicted RBP12.93□□□□□ -0.34
SGMS1-203ENST00000429490 EFCAB14O75071 495 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 UBXN7O94888 489 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 IGHA2P01877 340 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 LAG3P18627 525 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 PRKACBP22694 351 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 EVI2BP34910 448 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 TRIM23P36406 574 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 SLC6A11P48066 632 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 GZMKP49863 264 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 SF3A2Q15428 464 aaKnown RBP12.93□□□□□ -0.34
SGMS1-203ENST00000429490 C6orf132Q5T0Z8 1188 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 HTR3DQ70Z44 454 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 PLCZ1Q86YW0 608 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 PLPP6Q8IY26 295 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 OR4E2Q8NGC2 313 aa12.93□□□□□ -0.34
SGMS1-203ENST00000429490 OR8K3Q8NH51 312 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms