RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 PPP3R2Q96LZ3 170 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 LMF2Q9BU23 707 aaKnown RBP16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 RTN4RQ9BZR6 473 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 KLRF1Q9NZS2 232 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 SH3BP4Q9P0V3 963 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 ATP6V1HQ9UI12 483 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 ACAD8Q9UKU7 415 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 MAPRE3Q9UPY8 281 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 RNF6Q9Y252 685 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 CACNA1DQ01668 2161 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 TMEM114B3SHH9 223 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 SCAMP2O15127 329 aaKnown RBP16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 ZWINTO95229 277 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 HSPA4LO95757 839 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 GLI4P10075 376 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 LAMP1P11279 417 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 CYP4B1P13584 511 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 RPP38P78345 283 aaKnown RBP16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 PMPCAQ10713 525 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 GAB1Q13480 694 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 IL23RQ5VWK5 629 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 SEM1Q6ZVN7 128 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 CCDC71Q8IV32 467 aaPredicted RBP16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 KRTCAP2Q8N6L1 136 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 SARAFQ96BY9 339 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 TTYH2Q9BSA4 534 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 SERHLQ9NQF3 203 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 SIRT3Q9NTG7 399 aaPredicted RBP16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 NTMQ9P121 344 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 HAO1Q9UJM8 370 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 SLC6A5Q9Y345 797 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 TACC2O95359 2948 aa16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 PHF3Q92576 2039 aaKnown RBP16.5■□□□□ 0.23
SSR4P1-202ENST00000429427 GXYLT2A0PJZ3 443 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 ABCB7O75027 752 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 TRAPPC6AO75865 159 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 IGKV1D-16P01601 117 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 ELAVL4P26378 380 aaKnown RBP16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 ADH7P40394 386 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 KIR3DL1P43629 444 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 ASMTP46597 345 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 PNLIPRP2P54317 469 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 PDCD2Q16342 344 aaPredicted RBP16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 ATP6AP1LQ52LC2 224 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 WIPI1Q5MNZ9 446 aaPredicted RBP16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 EXOSC6Q5RKV6 272 aaKnown RBP16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 RIMKLAQ8IXN7 391 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 ULK2Q8IYT8 1036 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 ACBD4Q8NC06 268 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 FAM83FQ8NEG4 500 aaPredicted RBP16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 OR1J4Q8NGS1 313 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 PPP1R14CQ8TAE6 165 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 MARVELD3Q96A59 401 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 MTERF3Q96E29 417 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 PPP1R36Q96LQ0 422 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 TIMP4Q99727 224 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 EXO5Q9H790 373 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 KCNK9Q9NPC2 374 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 EQTNQ9NQ60 294 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 ACSS1Q9NUB1 689 aaPredicted RBP16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 FBXL2Q9UKC9 423 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 WIF1Q9Y5W5 379 aa16.49■□□□□ 0.23
SSR4P1-202ENST00000429427 C15orf38-AP3S2A0A0A6YYH1 394 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 FIGNL2A6NMB9 653 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 FADS1O60427 444 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 IL12BP29460 328 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 SLC1A6P48664 564 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 TFF3Q07654 80 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 BST1Q10588 318 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 CYP27C1Q4G0S4 372 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 VASNQ6EMK4 673 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 YRDCQ86U90 279 aaKnown RBP16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 EID3Q8N140 333 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 FNDC5Q8NAU1 212 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 PIK3R3Q92569 461 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 TLCD1Q96CP7 247 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 TUBGCP3Q96CW5 907 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 TMCO6Q96DC7 493 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 ZBED6CLQ96FA7 236 aaPredicted RBP16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 UGT2B28Q9BY64 529 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 CBLCQ9ULV8 474 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 RAP2CQ9Y3L5 183 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 OR10H1Q9Y4A9 318 aa16.48■□□□□ 0.23
SSR4P1-202ENST00000429427 CSMD2Q7Z408 3487 aa16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 A0A0G2JNJ9 132 aa16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 TMEM120BA0PK00 339 aa16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 WDR1O75083 606 aa16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 TOXO94900 526 aa16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 ACP2P11117 423 aa16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 G6PDP11413 515 aa16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 BMP7P18075 431 aa16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 EVI2BP34910 448 aa16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 HPCAL1P37235 193 aa16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 MANFP55145 182 aaKnown RBP16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 WNT3P56703 355 aa16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 PSPHP78330 225 aa16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 EFR3AQ14156 821 aa16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 NHSL2Q5HYW2 709 aa16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 C1orf185Q5T7R7 199 aa16.47■□□□□ 0.23
SSR4P1-202ENST00000429427 WLSQ5T9L3 541 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms