RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 FABP7O15540 132 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 ICMTO60725 284 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 NOS1APO75052 506 aaPredicted RBP11.73□□□□□ -0.53
CDH3-202ENST00000429102 FGBP02675 491 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 ZNF19P17023 458 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 POU4F3Q15319 338 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 FCN2Q15485 313 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 ZDHHC20Q5W0Z9 365 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 SENP5Q96HI0 755 aaPredicted RBP11.73□□□□□ -0.53
CDH3-202ENST00000429102 STMN3Q9NZ72 180 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 ATG4BQ9Y4P1 393 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 GABRPO00591 440 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 KIAA0355O15063 1070 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 CLUP10909 449 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 ELK1P19419 428 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 CERS1P27544 350 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 TRHRP34981 398 aaPredicted RBP11.73□□□□□ -0.53
CDH3-202ENST00000429102 LIMS1P48059 325 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 HMGA2P52926 109 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 RPL6Q02878 288 aaKnown RBP11.73□□□□□ -0.53
CDH3-202ENST00000429102 RNF165Q6ZSG1 346 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 PRSS45Q7RTY3 260 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 NEURL3Q96EH8 262 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 MAGEB10Q96LZ2 347 aaPredicted RBP11.73□□□□□ -0.53
CDH3-202ENST00000429102 DPH1Q9BZG8 443 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 RETREG1Q9H6L5 497 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 FZD3Q9NPG1 666 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 ZNF224Q9NZL3 707 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 SLC23A1Q9UHI7 598 aa11.73□□□□□ -0.53
CDH3-202ENST00000429102 CIB4A0PJX0 185 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 IGLON5A6NGN9 336 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 EIF3FO00303 357 aaPredicted RBP11.72□□□□□ -0.53
CDH3-202ENST00000429102 LIMS3P0CW19 117 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 LIMS4P0CW20 117 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 RPL3P39023 403 aaKnown RBP11.72□□□□□ -0.53
CDH3-202ENST00000429102 COX10Q12887 443 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 CAMK2BQ13554 666 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 GLYR1Q49A26 553 aaPredicted RBP11.72□□□□□ -0.53
CDH3-202ENST00000429102 FAM46CQ5VWP2 391 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 GRHL3Q8TE85 626 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 TRIM63Q969Q1 353 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 ENAMQ9NRM1 1142 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 SIRT3Q9NTG7 399 aaPredicted RBP11.72□□□□□ -0.53
CDH3-202ENST00000429102 PRELID1Q9Y255 219 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 PRRT4C9JH25 899 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 TBX6O95947 436 aaPredicted RBP11.72□□□□□ -0.53
CDH3-202ENST00000429102 RHOP08100 348 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 CTSAP10619 480 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 ARSBP15848 533 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 POU3F3P20264 500 aaPredicted RBP11.72□□□□□ -0.53
CDH3-202ENST00000429102 SLC1A3P43003 542 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 DCDC1P59894 354 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 TGM3Q08188 693 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 E2F2Q14209 437 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 FGFBP1Q14512 234 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 NUDT13Q86X67 352 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 SERPINA12Q8IW75 414 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 AP3S1Q92572 193 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 ARRDC3Q96B67 414 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 ZCCHC2Q9C0B9 1178 aaKnown RBP11.72□□□□□ -0.53
CDH3-202ENST00000429102 ADAP2Q9NPF8 381 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 ATP13A2Q9NQ11 1180 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 FBXL4Q9UKA2 621 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 GMFGO60234 142 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 CRYZL1O95825 349 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 ATF4P18848 351 aaPredicted RBP11.72□□□□□ -0.53
CDH3-202ENST00000429102 TBXA2RP21731 343 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 NOS3P29474 1203 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 NTSP30990 170 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 MMP12P39900 470 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 MAGEB1P43366 347 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 CCR6P51684 374 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 ERVFC1P60507 584 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 PCDH1Q08174 1060 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 PLK5Q496M5 336 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 KLHL22Q53GT1 634 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 CCDC149Q6ZUS6 474 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 METTL3Q86U44 580 aaKnown RBP11.72□□□□□ -0.53
CDH3-202ENST00000429102 TBC1D19Q8N5T2 526 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 MKRN2Q9H000 416 aaKnown RBP11.72□□□□□ -0.53
CDH3-202ENST00000429102 SPRTNQ9H040 489 aaPredicted RBP11.72□□□□□ -0.53
CDH3-202ENST00000429102 KLHL42Q9P2K6 505 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 TNFRSF10DQ9UBN6 386 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 LAMA1P25391 3075 aa11.72□□□□□ -0.53
CDH3-202ENST00000429102 SEC16AO15027 2179 aa11.71□□□□□ -0.53
CDH3-202ENST00000429102 URB1O60287 2271 aaKnown RBP11.71□□□□□ -0.53
CDH3-202ENST00000429102 ALX3O95076 343 aa11.71□□□□□ -0.53
CDH3-202ENST00000429102 SLC35G4P0C7Q5 338 aa11.71□□□□□ -0.53
CDH3-202ENST00000429102 SAGP10523 405 aaPredicted RBP11.71□□□□□ -0.53
CDH3-202ENST00000429102 TALDO1P37837 337 aa11.71□□□□□ -0.53
CDH3-202ENST00000429102 GCGRP47871 477 aa11.71□□□□□ -0.53
CDH3-202ENST00000429102 CCR8P51685 355 aa11.71□□□□□ -0.53
CDH3-202ENST00000429102 SNRPGP62308 76 aaKnown RBP11.71□□□□□ -0.53
CDH3-202ENST00000429102 SLC36A4Q6YBV0 504 aa11.71□□□□□ -0.53
CDH3-202ENST00000429102 CPA6Q8N4T0 437 aa11.71□□□□□ -0.53
CDH3-202ENST00000429102 MCHR1Q99705 422 aa11.71□□□□□ -0.53
CDH3-202ENST00000429102 GAL3ST1Q99999 423 aa11.71□□□□□ -0.53
CDH3-202ENST00000429102 DPCDQ9BVM2 203 aaPredicted RBP11.71□□□□□ -0.53
CDH3-202ENST00000429102 C1QTNF6Q9BXI9 259 aa11.71□□□□□ -0.53
CDH3-202ENST00000429102 ENKD1Q9H0I2 346 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms