RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 IFT52Q9Y366 437 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 OR10H1Q9Y4A9 318 aa14.04□□□□□ -0.16
GINS3-203ENST00000426538 SAC3D1A6NKF1 404 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 BRINP1O60477 761 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 DDAH2O95865 285 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 CAPNS1P04632 268 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 CYC1P08574 325 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 FTH1P19P0C7X4 201 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 KCNC4Q03721 635 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 GPR68Q15743 365 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 SFT2D3Q587I9 215 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 CCNJQ5T5M9 372 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 OR2T5Q6IEZ7 315 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 FIGNL1Q6PIW4 674 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 IZUMO2Q6UXV1 221 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 FRRS1Q6ZNA5 592 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 ANKRD37Q7Z713 158 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 OR1N1Q8NGS0 311 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 OR2T29Q8NH02 315 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 ZNF721Q8TF20 911 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 SDCCAG3Q96C92 435 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 RMND5BQ96G75 393 aaPredicted RBP14.03□□□□□ -0.16
GINS3-203ENST00000426538 C7orf34Q96L11 122 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 ZNF184Q99676 751 aaPredicted RBP14.03□□□□□ -0.16
GINS3-203ENST00000426538 COQ10BQ9H8M1 238 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 SLC13A4Q9UKG4 626 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 OAZ3Q9UMX2 235 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 DTX4Q9Y2E6 619 aa14.03□□□□□ -0.16
GINS3-203ENST00000426538 FAM32AQ9Y421 112 aaKnown RBP14.03□□□□□ -0.16
GINS3-203ENST00000426538 TEX51A0A1B0GUA7 166 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 SPAARA0A1B0GVQ0 90 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 GXYLT2A0PJZ3 443 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 CNOT3O75175 753 aaKnown RBP14.02□□□□□ -0.16
GINS3-203ENST00000426538 E2F6O75461 281 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 KCNK2O95069 426 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 IGKV3-11P04433 115 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 IFNW1P05000 195 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 PABPC4LP0CB38 370 aaKnown RBP14.02□□□□□ -0.16
GINS3-203ENST00000426538 CT45A8P0DMV1 189 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 CT45A9P0DMV2 189 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 IL7RP16871 459 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 TNFRSF1BP20333 461 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 CD247P20963 164 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 ATP6V1C1P21283 382 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 RFX3P48380 749 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 ARHGDIAP52565 204 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 CT45A2Q5DJT8 189 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 C3orf38Q5JPI3 329 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 HLA-DQA1Q5Y7H0 255 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 TYW3Q6IPR3 259 aaKnown RBP14.02□□□□□ -0.16
GINS3-203ENST00000426538 C6orf15Q6UXA7 325 aaPredicted RBP14.02□□□□□ -0.16
GINS3-203ENST00000426538 ZNF517Q6ZMY9 492 aaPredicted RBP14.02□□□□□ -0.16
GINS3-203ENST00000426538 ZDHHC13Q8IUH4 622 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 ZNF619Q8N2I2 560 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 GALNT4Q8N4A0 578 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 ZNF321PQ8N8H1 164 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 OR52P1PQ8NH57 321 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 DNAJC9Q8WXX5 260 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 PMM1Q92871 262 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 TMBIM1Q969X1 311 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 ZG16BQ96DA0 208 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 ZNF347Q96SE7 839 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 PINK1Q9BXM7 581 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 ITPAQ9BY32 194 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 ZNF350Q9GZX5 532 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 QRSL1Q9H0R6 528 aaKnown RBP14.02□□□□□ -0.16
GINS3-203ENST00000426538 NTN4Q9HB63 628 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 POLE3Q9NRF9 147 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 CNOT11Q9UKZ1 510 aaKnown RBP14.02□□□□□ -0.16
GINS3-203ENST00000426538 ABCG2Q9UNQ0 655 aa14.02□□□□□ -0.16
GINS3-203ENST00000426538 DSPPQ9NZW4 1301 aa14.02□□□□□ -0.17
GINS3-203ENST00000426538 C2orf92A0A1B0GVN3 265 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 DIRAS1O95057 198 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 PRSS23O95084 383 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 CLPSP04118 112 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 TRHRP34981 398 aaPredicted RBP14.01□□□□□ -0.17
GINS3-203ENST00000426538 PPICP45877 212 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 DCAF7P61962 342 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 LARS2Q15031 903 aaKnown RBP14.01□□□□□ -0.17
GINS3-203ENST00000426538 NCF4Q15080 339 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 SLC29A4Q7RTT9 530 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 CPEB2Q7Z5Q1 589 aaKnown RBP14.01□□□□□ -0.17
GINS3-203ENST00000426538 HMGN2P46Q86SG4 172 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 GPR32P1Q8NGA4 272 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 LPAR4Q99677 370 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 G6PC3Q9BUM1 346 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 NUDT9Q9BW91 350 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 THSD1Q9NS62 852 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 KLHL28Q9NXS3 571 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 CBLCQ9ULV8 474 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 SLC9A8Q9Y2E8 581 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 PTRH2Q9Y3E5 179 aaKnown RBP14.01□□□□□ -0.17
GINS3-203ENST00000426538 PCDHGA3Q9Y5H0 932 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 CCDC88CQ9P219 2028 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 CUL9Q8IWT3 2517 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 IGHV3-20A0A0C4DH32 117 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 OR6C76A6NM76 312 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 G3V2T6 193 aa14.01□□□□□ -0.17
GINS3-203ENST00000426538 CSRP1P21291 193 aaKnown RBP14.01□□□□□ -0.17
GINS3-203ENST00000426538 PIGAP37287 484 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms