RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 ADAM29Q9UKF5 820 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 GPR55Q9Y2T6 319 aaPredicted RBP13.19□□□□□ -0.3
PDAP1-202ENST00000426447 ZNF337Q9Y3M9 751 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 ZNF175Q9Y473 711 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 MED12LQ86YW9 2145 aa13.18□□□□□ -0.3
PDAP1-202ENST00000426447 H3BML4 177 aa13.18□□□□□ -0.3
PDAP1-202ENST00000426447 CD5LO43866 347 aa13.18□□□□□ -0.3
PDAP1-202ENST00000426447 BCAS2O75934 225 aaPredicted RBP13.18□□□□□ -0.3
PDAP1-202ENST00000426447 PLGP00747 810 aaPredicted RBP13.18□□□□□ -0.3
PDAP1-202ENST00000426447 MTHFD2P13995 350 aa13.18□□□□□ -0.3
PDAP1-202ENST00000426447 PCSK2P16519 638 aa13.18□□□□□ -0.3
PDAP1-202ENST00000426447 ALDH9A1P49189 494 aa13.18□□□□□ -0.3
PDAP1-202ENST00000426447 ALDH18A1P54886 795 aaKnown RBP13.18□□□□□ -0.3
PDAP1-202ENST00000426447 CLDN15P56746 228 aa13.18□□□□□ -0.3
PDAP1-202ENST00000426447 MRPS35P82673 323 aaKnown RBP13.18□□□□□ -0.3
PDAP1-202ENST00000426447 FAM180BQ6P0A1 224 aa13.18□□□□□ -0.3
PDAP1-202ENST00000426447 C3orf62Q6ZUJ4 267 aa13.18□□□□□ -0.3
PDAP1-202ENST00000426447 TRPC4APQ8TEL6 797 aa13.18□□□□□ -0.3
PDAP1-202ENST00000426447 GFM2Q969S9 779 aaKnown RBP13.18□□□□□ -0.3
PDAP1-202ENST00000426447 CDK15Q96Q40 435 aa13.18□□□□□ -0.3
PDAP1-202ENST00000426447 NOL11Q9H8H0 719 aaKnown RBP13.18□□□□□ -0.3
PDAP1-202ENST00000426447 SAYSD1Q9NPB0 183 aa13.18□□□□□ -0.3
PDAP1-202ENST00000426447 CES1P1Q9UKY3 287 aa13.18□□□□□ -0.3
PDAP1-202ENST00000426447 ACOT9Q9Y305 439 aa13.18□□□□□ -0.3
PDAP1-202ENST00000426447 EMC9Q9Y3B6 208 aa13.18□□□□□ -0.3
PDAP1-202ENST00000426447 TNPO3Q9Y5L0 923 aaKnown RBP13.18□□□□□ -0.3
PDAP1-202ENST00000426447 ZANQ9Y493 2812 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 TCRBV9S1A1TA0A576 114 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 LINC01387J3KSC0 135 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 SCO2O43819 266 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 TSPAN2O60636 221 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 FCGR2AP12318 317 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 PNLIPRP2P54317 469 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 CTBP2P56545 445 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 MRPS22P82650 360 aaKnown RBP13.17□□□□□ -0.3
PDAP1-202ENST00000426447 LTB4RQ15722 352 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 FAM83EQ2M2I3 478 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 SGO1Q5FBB7 561 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 FRG2Q64ET8 278 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 PPM1NQ8N819 430 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 OR5M1Q8NGP8 315 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 RHEBL1Q8TAI7 183 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 KCTD4Q8WVF5 259 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 ZBED6CLQ96FA7 236 aaPredicted RBP13.17□□□□□ -0.3
PDAP1-202ENST00000426447 FRG2BQ96QU4 278 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 PTGES2Q9H7Z7 377 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 SDHAF3Q9NRP4 125 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 PLSCR4Q9NRQ2 329 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 MED11Q9P086 117 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 SNX24Q9Y343 169 aa13.17□□□□□ -0.3
PDAP1-202ENST00000426447 FAM159BA6NKW6 160 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 A8MV72 311 aaPredicted RBP13.16□□□□□ -0.3
PDAP1-202ENST00000426447 TP73O15350 636 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 PHF1O43189 567 aaPredicted RBP13.16□□□□□ -0.3
PDAP1-202ENST00000426447 ESRRBO95718 433 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 ACVR1BP36896 505 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 CCNG1P51959 295 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 CLDN20P56880 219 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 CORO7P57737 925 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 DUSP2Q05923 314 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 IFT88Q13099 833 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 ERCC6LQ2NKX8 1250 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 STAC2Q6ZMT1 411 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 CYS1Q717R9 158 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 CCDC116Q8IYX3 515 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 METTL4Q8N3J2 472 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 EFHD2Q96C19 240 aaPredicted RBP13.16□□□□□ -0.3
PDAP1-202ENST00000426447 TACO1Q9BSH4 297 aaKnown RBP13.16□□□□□ -0.3
PDAP1-202ENST00000426447 FAIM2Q9BWQ8 316 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 ACTR6Q9GZN1 396 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 ANKRA2Q9H9E1 313 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 CPSF2Q9P2I0 782 aaKnown RBP13.16□□□□□ -0.3
PDAP1-202ENST00000426447 CLEC4AQ9UMR7 237 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 SLC12A4Q9UP95 1085 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 OR10H1Q9Y4A9 318 aa13.16□□□□□ -0.3
PDAP1-202ENST00000426447 OR2M5A3KFT3 312 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 C17orf51A8MQB3 221 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 CLOCKO15516 846 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 NME6O75414 186 aaPredicted RBP13.15□□□□□ -0.3
PDAP1-202ENST00000426447 AQP8O94778 261 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 SIX3O95343 332 aaPredicted RBP13.15□□□□□ -0.3
PDAP1-202ENST00000426447 F12P00748 615 aaPredicted RBP13.15□□□□□ -0.3
PDAP1-202ENST00000426447 CT45A8P0DMV1 189 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 CT45A9P0DMV2 189 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 TCP1P17987 556 aaKnown RBP13.15□□□□□ -0.3
PDAP1-202ENST00000426447 CDKN1AP38936 164 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 GAS1P54826 345 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 PSPHP78330 225 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 STX5Q13190 355 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 ACAP2Q15057 778 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 CT45A2Q5DJT8 189 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 KLC3Q6P597 504 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 BEND4Q6ZU67 534 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 COMMD6Q7Z4G1 85 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 STK32CQ86UX6 486 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 SLC44A2Q8IWA5 706 aaPredicted RBP13.15□□□□□ -0.3
PDAP1-202ENST00000426447 OR2M3Q8NG83 312 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 OR6K3Q8NGY3 331 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 TM4SF18Q96CE8 201 aa13.15□□□□□ -0.3
PDAP1-202ENST00000426447 CNRIP1Q96F85 164 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms