RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 TOXO94900 526 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 IFI6P09912 130 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 BMP7P18075 431 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 ELAVL4P26378 380 aaKnown RBP16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 CHRNB4P30926 498 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 MAP3K8P41279 467 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 ZNF155Q12901 538 aaPredicted RBP16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 HSPB3Q12988 150 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 EFR3AQ14156 821 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 C6orf136Q5SQH8 315 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 CEP85LQ5SZL2 805 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 DCST1Q5T197 706 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 C1orf185Q5T7R7 199 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 YRDCQ86U90 279 aaKnown RBP16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 HOMEZQ8IX15 550 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 MCEMP1Q8IX19 187 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 LIX1Q8N485 282 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 FAM83FQ8NEG4 500 aaPredicted RBP16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 ASB5Q8WWX0 329 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 EFHD2Q96C19 240 aaPredicted RBP16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 PPCDCQ96CD2 204 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 PPP3R2Q96LZ3 170 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 LMF2Q9BU23 707 aaKnown RBP16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 RTN4RQ9BZR6 473 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 ENKD1Q9H0I2 346 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 SERHLQ9NQF3 203 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 DDX18Q9NVP1 670 aaKnown RBP16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 KLRF1Q9NZS2 232 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 FLRT3Q9NZU0 649 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 SH3BP4Q9P0V3 963 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 NTMQ9P121 344 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 Q9UFV3 132 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 FBXL2Q9UKC9 423 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 MAPRE3Q9UPY8 281 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 NCKAP5O14513 1909 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 NINQ8N4C6 2090 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 C15orf38-AP3S2A0A0A6YYH1 394 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 NKX2-6A6NCS4 301 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 PDPK1O15530 556 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 CBR3O75828 277 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 TUBBP07437 444 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 HOXD4P09016 255 aaPredicted RBP16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 CYP4B1P13584 511 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 GABRA1P14867 456 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 PSPHP78330 225 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 CYP27C1Q4G0S4 372 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 GIMAP5Q96F15 307 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 WDYHV1Q96HA8 205 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 TREX2Q9BQ50 279 aaPredicted RBP16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 UGT2B28Q9BY64 529 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 TRIM8Q9BZR9 551 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 PRDM14Q9GZV8 571 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 NPDC1Q9NQX5 325 aaPredicted RBP16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 ATP6V1HQ9UI12 483 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 CBLCQ9ULV8 474 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 OR10H1Q9Y4A9 318 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 CSMD1Q96PZ7 3565 aa16.7■□□□□ 0.26
SMARCAL1-205ENST00000425815 GXYLT2A0PJZ3 443 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 AHRRA9YTQ3 701 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 BIRC5O15392 142 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 FADS1O60427 444 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 SKAP2O75563 359 aaPredicted RBP16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 IGKV1D-16P01601 117 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 SERPINE1P05121 402 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 COX6B1P14854 86 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 EFNA1P20827 205 aaPredicted RBP16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 IL12BP29460 328 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 TOMM20Q15388 145 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 CHI3L2Q15782 390 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 OR5M10Q6IEU7 315 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 PLCZ1Q86YW0 608 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 OR7A2PQ8NGA2 310 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 OR10Q1Q8NGQ4 319 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 MTERF3Q96E29 417 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 PGM2Q96G03 612 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 SPOCK3Q9BQ16 436 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 C1orf50Q9BV19 199 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 OR2B2Q9GZK3 357 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 ACSS1Q9NUB1 689 aaPredicted RBP16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 WIF1Q9Y5W5 379 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 ACTL7BQ9Y614 415 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 DNAJC13O75165 2243 aa16.69■□□□□ 0.26
SMARCAL1-205ENST00000425815 FAM90A27PA6NNH2 459 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 TM9SF1O15321 606 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 ZIC3O60481 467 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 IL33O95760 270 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 LAMP1P11279 417 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 PRPS2P11908 318 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 IGFBP2P18065 325 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 GABRA3P34903 492 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 PTGER4P35408 488 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 KRT20P35900 424 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 ASMTP46597 345 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 MANFP55145 182 aaKnown RBP16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 WNT3P56703 355 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 ABCE1P61221 599 aaKnown RBP16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 PTGR1Q14914 329 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 ACSF3Q4G176 576 aaPredicted RBP16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 IL23RQ5VWK5 629 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms