RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 CAMKK1Q8N5S9 505 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 OR52P1PQ8NH57 321 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 OR51A7Q8NH64 312 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 PFN4Q8NHR9 129 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 CCDC3Q9BQI4 270 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 DPH1Q9BZG8 443 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 SLIRPQ9GZT3 109 aaKnown RBP11.17□□□□□ -0.62
PTPRN-204ENST00000423636 THSD1Q9NS62 852 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 GPR179Q6PRD1 2367 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 HRO43593 1189 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 SLC35G6P0C7Q6 338 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 AHRP35869 848 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 ETV5P41161 510 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 ETV1P50549 477 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 ZNF33BQ06732 778 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 ZNF791Q3KP31 576 aaPredicted RBP11.16□□□□□ -0.62
PTPRN-204ENST00000423636 ENTPD8Q5MY95 495 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 FCRL6Q6DN72 434 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 PLEKHM3Q6ZWE6 761 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 MTERF3Q96E29 417 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 BTBD2Q9BX70 525 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 RACGAP1Q9H0H5 632 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 PCBD2Q9H0N5 130 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 SLC7A7Q9UM01 511 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 LAMA5O15230 3695 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 ZAR1LA6NP61 321 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 A8MVJ9 347 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 CDC42EP2O14613 210 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 PRICKLE3O43900 615 aaPredicted RBP11.16□□□□□ -0.62
PTPRN-204ENST00000423636 SEMA3DO95025 777 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 THY1P04216 161 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 HBQ1P09105 142 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 OSMP13725 252 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 SPNP16150 400 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 INAVAQ3KP66 663 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 KLHL12Q53G59 568 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 MFSD4BQ5TF39 518 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 C22orf42Q6IC83 251 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 POMZP3Q6PJE2 187 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 ABI3BPQ7Z7G0 1075 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 PEX11GQ96HA9 241 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 LMF1Q96S06 567 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 MCHR1Q99705 422 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 TBC1D17Q9HA65 648 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 A4GALTQ9NPC4 353 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 C20orf141Q9NUB4 165 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 TMEM9Q9P0T7 183 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 CPNE7Q9UBL6 633 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 FBXL4Q9UKA2 621 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.16□□□□□ -0.62
PTPRN-204ENST00000423636 AP1M2Q9Y6Q5 423 aa11.16□□□□□ -0.62
PTPRN-204ENST00000423636 SEMA4FO95754 770 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 ALPPP05187 535 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 CLUP10909 449 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 LIMS1P48059 325 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 BTG2P78543 158 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 PCDH1Q08174 1060 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 NFATC4Q14934 902 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 TMEM64Q6YI46 380 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 USP30Q70CQ3 517 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 SLC44A3Q8N4M1 653 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 DCLRE1CQ96SD1 692 aaKnown RBP11.15□□□□□ -0.62
PTPRN-204ENST00000423636 TIMM29Q9BSF4 260 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 KIR3DX1Q9H7L2 352 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 TRPV4Q9HBA0 871 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 CES1P1Q9UKY3 287 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 SLC9A8Q9Y2E8 581 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 WDR45Q9Y484 360 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 CFAP47Q6ZTR5 3102 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 A0A1W2PPK0 400 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 CSO75390 466 aaKnown RBP11.15□□□□□ -0.62
PTPRN-204ENST00000423636 MED26O95402 600 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 DLGAP3O95886 979 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 THEGLP0DJG4 465 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 HNRNPA2B1P22626 353 aaKnown RBP11.15□□□□□ -0.62
PTPRN-204ENST00000423636 GABRA3P34903 492 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 SLC9A3P48764 834 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 HCCSP53701 268 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 SH3BGRP55822 239 aaPredicted RBP11.15□□□□□ -0.62
PTPRN-204ENST00000423636 ILF3Q12906 894 aaKnown RBP eCLIP11.15□□□□□ -0.62
PTPRN-204ENST00000423636 ADAM15Q13444 863 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 HTR4Q13639 388 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 DHRS4L2Q6PKH6 230 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 SHISA6Q6ZSJ9 500 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 EGFL6Q8IUX8 553 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 KLHL6Q8WZ60 621 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 METTL2AQ96IZ6 378 aaKnown RBP11.15□□□□□ -0.62
PTPRN-204ENST00000423636 POU2F3Q9UKI9 436 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 GPC6Q9Y625 555 aaPredicted RBP11.15□□□□□ -0.62
PTPRN-204ENST00000423636 SPIN1Q9Y657 262 aaPredicted RBP11.15□□□□□ -0.62
PTPRN-204ENST00000423636 NUP210Q8TEM1 1887 aaPredicted RBP11.15□□□□□ -0.62
PTPRN-204ENST00000423636 TP53BP1Q12888 1972 aaPredicted RBP11.15□□□□□ -0.62
PTPRN-204ENST00000423636 FUOMA2VDF0 154 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 A8MV72 311 aaPredicted RBP11.15□□□□□ -0.62
PTPRN-204ENST00000423636 ZNF701M0R085 212 aaPredicted RBP11.15□□□□□ -0.62
PTPRN-204ENST00000423636 SOCS6O14544 535 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 IMPA2O14732 288 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 REM1O75628 298 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 MPDZO75970 2070 aa11.15□□□□□ -0.62
PTPRN-204ENST00000423636 GIPRP48546 466 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms