RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 SNF8Q96H20 258 aa3.37□□□□□ -1.87
CNGA1-203ENST00000420489 OLFM3Q96PB7 478 aa3.37□□□□□ -1.87
CNGA1-203ENST00000420489 NR1H4Q96RI1 486 aaPredicted RBP3.37□□□□□ -1.87
CNGA1-203ENST00000420489 PKP4Q99569 1192 aa3.37□□□□□ -1.87
CNGA1-203ENST00000420489 ZNF184Q99676 751 aaPredicted RBP3.37□□□□□ -1.87
CNGA1-203ENST00000420489 TRAF4Q9BUZ4 470 aaPredicted RBP3.37□□□□□ -1.87
CNGA1-203ENST00000420489 MIS12Q9H081 205 aa3.37□□□□□ -1.87
CNGA1-203ENST00000420489 THAP2Q9H0W7 228 aa3.37□□□□□ -1.87
CNGA1-203ENST00000420489 SPACA1Q9HBV2 294 aa3.37□□□□□ -1.87
CNGA1-203ENST00000420489 FGF22Q9HCT0 170 aa3.37□□□□□ -1.87
CNGA1-203ENST00000420489 SAR1AQ9NR31 198 aa3.37□□□□□ -1.87
CNGA1-203ENST00000420489 EIF2B3Q9NR50 452 aaKnown RBP3.37□□□□□ -1.87
CNGA1-203ENST00000420489 ABCC13Q9NSE7 274 aa3.37□□□□□ -1.87
CNGA1-203ENST00000420489 SENP1Q9P0U3 644 aa3.37□□□□□ -1.87
CNGA1-203ENST00000420489 HMGXB4Q9UGU5 601 aa3.37□□□□□ -1.87
CNGA1-203ENST00000420489 LGALS13Q9UHV8 139 aa3.37□□□□□ -1.87
CNGA1-203ENST00000420489 TMPRSS11EQ9UL52 423 aa3.37□□□□□ -1.87
CNGA1-203ENST00000420489 CAMK2AQ9UQM7 478 aa3.37□□□□□ -1.87
CNGA1-203ENST00000420489 CHKBQ9Y259 395 aa3.37□□□□□ -1.87
CNGA1-203ENST00000420489 A0A1B0GWJ7 208 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 GAGE12BA1L429 117 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 GAGE12HA6NDE8 117 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 HSBP1L1C9JCN9 74 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 H7C417 338 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 PSMD11O00231 422 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 GYG2O15488 501 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 ADAM20O43506 726 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CLN5O75503 358 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 NR3C1P04150 777 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 MMP2P08253 660 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 PABPC4LP0CB38 370 aaKnown RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 SRCP12931 536 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 ZNF23P17027 643 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 GM2AP17900 193 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 SERPINF1P36955 418 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CBX5P45973 191 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 POLR2GP62487 172 aaKnown RBP eCLIP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 YWHAZP63104 245 aaKnown RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 TBL3Q12788 808 aaKnown RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CYLC2Q14093 348 aaPredicted RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 HERC3Q15034 1050 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 TMED2Q15363 201 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 MAPRE2Q15555 327 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CYP1B1Q16678 543 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 MEP1AQ16819 746 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 ZNF699Q32M78 642 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 C19orf54Q5BKX5 351 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CARD16Q5EG05 197 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 RAB41Q5JT25 222 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 BSPRYQ5W0U4 402 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 RTL6Q6ICC9 239 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CGB2Q6NT52 195 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 TTC27Q6P3X3 843 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 FAM199XQ6PEV8 388 aaPredicted RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 FRMD7Q6ZUT3 714 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 PHLDB2Q86SQ0 1253 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 C12orf56Q8IXR9 622 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 ST13P4Q8IZP2 240 aaPredicted RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 LGI2Q8N0V4 545 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 POC1BQ8TC44 478 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 SLC35C1Q96A29 364 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 NDNQ99608 321 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CCT7Q99832 543 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CITED2Q99967 270 aaPredicted RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 MESP1Q9BRJ9 268 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 WDR26Q9H7D7 661 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 ZDHHC11Q9H8X9 412 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CALHM2Q9HA72 323 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 FARSBQ9NSD9 589 aaKnown RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 ATXN10Q9UBB4 475 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 ZNF212Q9UDV6 495 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 DNAJC12Q9UKB3 198 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 TMCO1Q9UM00 188 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 ERVK-19Q9WJR5 959 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 SNX13Q9Y5W8 968 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CLCA3PQ9Y6N3 262 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 EXOC1LA0A1B0GW35 172 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 GSAPA4D1B5 854 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 E9PBE3 544 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 F8W8V4 182 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 H3BML4 177 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 HAT1O14929 419 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 SMAD9O15198 467 aaKnown RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 EDF1O60869 148 aaKnown RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 HAUS5O94927 633 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 PTBP3O95758 552 aaKnown RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 BCL10O95999 233 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 HLA-DRAP01903 254 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CSF1P09603 554 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 DANCRP0C864 163 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 UBTFL6P0CB48 400 aaPredicted RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CA4P22748 312 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 MGAT1P26572 445 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 ZFP36P26651 326 aaKnown RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 GP5P40197 560 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CHN2P52757 468 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 ARSFP54793 590 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 GMFBP60983 142 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 ALCAMQ13740 583 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 MESDQ14696 234 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms