RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 EPHX4Q8IUS5 362 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 LILRA2Q8N149 483 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF619Q8N2I2 560 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 TMEM102Q8N9M5 508 aaPredicted RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 CHDHQ8NE62 594 aaPredicted RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 OR2T29Q8NH02 315 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 STT3BQ8TCJ2 826 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 SLC2A12Q8TD20 617 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 NRG4Q8WWG1 115 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 NR4A3Q92570 626 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 MR1Q95460 341 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 CTHRC1Q96CG8 243 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 RMND5BQ96G75 393 aaPredicted RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 LRFN5Q96NI6 719 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 BTBD9Q96Q07 612 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 GAL3ST4Q96RP7 486 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF347Q96SE7 839 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 CIB1Q99828 191 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 CTRCQ99895 268 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 LMF2Q9BU23 707 aaKnown RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 OSBPL10Q9BXB5 764 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 PINK1Q9BXM7 581 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 OR8D2Q9GZM6 311 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 VN1R1Q9GZP7 353 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF350Q9GZX5 532 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 SLC26A1Q9H2B4 701 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 SEMA6AQ9H2E6 1030 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 PIGUQ9H490 435 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 ARMC7Q9H6L4 198 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 APMAPQ9HDC9 416 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 PARD6AQ9NPB6 346 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 FBXO8Q9NRD0 319 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 PNO1Q9NRX1 252 aaKnown RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 OCIAD1Q9NX40 245 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 PISDQ9UG56 409 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 MRTO4Q9UKD2 239 aaKnown RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 PRDM4Q9UKN5 801 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 MKL2Q9ULH7 1088 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 OAZ3Q9UMX2 235 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF443Q9Y2A4 671 aaPredicted RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 LRCH1Q9Y2L9 728 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 SAMHD1Q9Y3Z3 626 aaKnown RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 FAM32AQ9Y421 112 aaKnown RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 TMEM184BQ9Y519 407 aaPredicted RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 GPC6Q9Y625 555 aaPredicted RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 VPS13AQ96RL7 3174 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 FAM186AA6NE01 2351 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 MYOCOSA0A1B0GUC4 107 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 FAM149AA5PLN7 773 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 FRG2CA6NGY1 282 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 IDSB3KWA1 339 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 MEN1O00255 615 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 EI24O14681 340 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 PLD2O14939 933 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 HS6ST1O60243 411 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ALOX12BO75342 701 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 DNAJB5O75953 348 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 RASAL1O95294 804 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 MT-CO3P00414 261 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 DBIP07108 87 aaKnown RBP5.54□□□□□ -1.52
HMGB3-202ENST00000419110 FESP07332 822 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 CD63P08962 238 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ZGLP1P0C6A0 271 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 PABPC4LP0CB38 370 aaKnown RBP5.54□□□□□ -1.52
HMGB3-202ENST00000419110 CD247P20963 164 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 FPR1P21462 350 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 IL12BP29460 328 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 PRKAR1BP31321 381 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 SSTR4P31391 388 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 SLC5A2P31639 672 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 IFNA8P32881 189 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 KRT20P35900 424 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 FOLR3P41439 243 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 RFX3P48380 749 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 MAN2A2P49641 1150 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ARHGDIAP52565 204 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 LIMK1P53667 647 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 DCAF7P61962 342 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 SELENOWP63302 87 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 KCNJ10P78508 379 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 BTG2P78543 158 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 VLDLRP98155 873 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 PLCXD2Q0VAA5 305 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 MGAT2Q10469 447 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 FUT7Q11130 342 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 EPS8Q12929 822 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 DAG1Q14118 895 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ERV3-1Q14264 604 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 NNATQ16517 81 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 DECR1Q16698 335 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ZSWIM7Q19AV6 140 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ARHGAP11BQ3KRB8 267 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 FLYWCH1Q4VC44 716 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 TRMT12Q53H54 448 aaKnown RBP5.54□□□□□ -1.52
HMGB3-202ENST00000419110 VWA2Q5GFL6 755 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF311Q5JNZ3 666 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 EXOSC6Q5RKV6 272 aaKnown RBP5.54□□□□□ -1.52
HMGB3-202ENST00000419110 RNF220Q5VTB9 566 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 CDCP2Q5VXM1 449 aa5.54□□□□□ -1.52
HMGB3-202ENST00000419110 LPCAT4Q643R3 524 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms