RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 Q9N2J8 555 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 SSU72Q9NP77 194 aaKnown RBP13.99□□□□□ -0.17
NUP50-204ENST00000417702 KCNJ16Q9NPI9 418 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 BAIAP2L1Q9UHR4 511 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 MRTO4Q9UKD2 239 aaKnown RBP13.99□□□□□ -0.17
NUP50-204ENST00000417702 MAPRE3Q9UPY8 281 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 ACTL7BQ9Y614 415 aa13.99□□□□□ -0.17
NUP50-204ENST00000417702 INTS1Q8N201 2190 aaKnown RBP13.99□□□□□ -0.17
NUP50-204ENST00000417702 NCKAP5O14513 1909 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 TTC36A6NLP5 189 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 FAM90A27PA6NNH2 459 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 AHRRA9YTQ3 701 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 C19orf84I3L1E1 186 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 TBX19O60806 448 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 PEX11AO75192 247 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 CBR3O75828 277 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 BCKDHAP12694 445 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 HPCAL1P37235 193 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 ZFP36L2P47974 494 aaKnown RBP13.98□□□□□ -0.17
NUP50-204ENST00000417702 MANFP55145 182 aaKnown RBP13.98□□□□□ -0.17
NUP50-204ENST00000417702 PSG6Q00889 435 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 CRYZQ08257 329 aaKnown RBP13.98□□□□□ -0.17
NUP50-204ENST00000417702 SF3B4Q15427 424 aaKnown RBP eCLIP13.98□□□□□ -0.174e-8■■■■■ 40.5
NUP50-204ENST00000417702 EIPR1Q53HC9 387 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 TNFAIP8L3Q5GJ75 292 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 EXOC3L1Q86VI1 746 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 PM20D2Q8IYS1 436 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 ULK2Q8IYT8 1036 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 OR4N2Q8NGD1 307 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 CIDECQ96AQ7 238 aaPredicted RBP13.98□□□□□ -0.17
NUP50-204ENST00000417702 EFHD2Q96C19 240 aaPredicted RBP13.98□□□□□ -0.17
NUP50-204ENST00000417702 MTERF3Q96E29 417 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 TIMP4Q99727 224 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 C3orf14Q9HBI5 128 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 SERHLQ9NQF3 203 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 ZDHHC2Q9UIJ5 367 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 SLC6A5Q9Y345 797 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 WIF1Q9Y5W5 379 aa13.98□□□□□ -0.17
NUP50-204ENST00000417702 WDR91A4D1P6 747 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 TM9SF1O15321 606 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 BIRC5O15392 142 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 SKAP2O75563 359 aaPredicted RBP13.97□□□□□ -0.17
NUP50-204ENST00000417702 PSMG1O95456 288 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 HSPA4LO95757 839 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 PRPS2P11908 318 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 PRF1P14222 555 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 ARRB2P32121 409 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 RPL3P39023 403 aaKnown RBP13.97□□□□□ -0.17
NUP50-204ENST00000417702 KIR3DL1P43629 444 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 PSMD4P55036 377 aaKnown RBP13.97□□□□□ -0.17
NUP50-204ENST00000417702 PDE7AQ13946 482 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 DECR1Q16698 335 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 XKR7Q5GH72 579 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 NHSL2Q5HYW2 709 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 WIPI1Q5MNZ9 446 aaPredicted RBP13.97□□□□□ -0.17
NUP50-204ENST00000417702 VASNQ6EMK4 673 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 GDF7Q7Z4P5 450 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 YRDCQ86U90 279 aaKnown RBP13.97□□□□□ -0.17
NUP50-204ENST00000417702 PLCZ1Q86YW0 608 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 WDSUB1Q8N9V3 476 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 FAM83FQ8NEG4 500 aaPredicted RBP13.97□□□□□ -0.17
NUP50-204ENST00000417702 OR6Y1Q8NGX8 325 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 OR14L1PQ8NHC6 308 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 CEP70Q8NHQ1 597 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 ABTB1Q969K4 478 aaPredicted RBP13.97□□□□□ -0.17
NUP50-204ENST00000417702 ZBTB9Q96C00 473 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 PKNOX2Q96KN3 472 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 SPOCK3Q9BQ16 436 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 UCK2Q9BZX2 261 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 ACSS1Q9NUB1 689 aaPredicted RBP13.97□□□□□ -0.17
NUP50-204ENST00000417702 CBLCQ9ULV8 474 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 NBPF19A0A087WUL8 3843 aa13.97□□□□□ -0.17
NUP50-204ENST00000417702 MED12Q93074 2177 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 ABCA12Q86UK0 2595 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 NKX2-6A6NCS4 301 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 ACTL6AO96019 429 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 SERPINE1P05121 402 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 CYP4B1P13584 511 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 BMP7P18075 431 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 GABRA3P34903 492 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 GAB1Q13480 694 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 CHI3L2Q15782 390 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 VPS26BQ4G0F5 336 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 ZNF385BQ569K4 471 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 RIPPLY2Q5TAB7 128 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 SZRD1Q7Z422 152 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 WDR53Q7Z5U6 358 aaPredicted RBP13.96□□□□□ -0.17
NUP50-204ENST00000417702 FNDC5Q8NAU1 212 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 TUBGCP3Q96CW5 907 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 LMF2Q9BU23 707 aaKnown RBP13.96□□□□□ -0.17
NUP50-204ENST00000417702 UGT2B28Q9BY64 529 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 KCNK9Q9NPC2 374 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 EQTNQ9NQ60 294 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 GIMAP2Q9UG22 337 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 ATP6V1HQ9UI12 483 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 CAMK2AQ9UQM7 478 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 CRYBG3Q68DQ2 2970 aa13.96□□□□□ -0.17
NUP50-204ENST00000417702 A0A0G2JNJ9 132 aa13.95□□□□□ -0.18
NUP50-204ENST00000417702 HSPB2A8KAH6 182 aa13.95□□□□□ -0.18
NUP50-204ENST00000417702 LYPLA1O75608 230 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms