RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 CORO7P57737 925 aa23.05■■□□□ 1.28
VEGFA-208ENST00000417285 VSNL1P62760 191 aa23.05■■□□□ 1.28
VEGFA-208ENST00000417285 IFFO1Q0D2I5 559 aa23.05■■□□□ 1.28
VEGFA-208ENST00000417285 PCLAFQ15004 111 aa23.05■■□□□ 1.28
VEGFA-208ENST00000417285 CLEC6AQ6EIG7 209 aa23.05■■□□□ 1.28
VEGFA-208ENST00000417285 NOXRED1Q6NXP6 359 aa23.05■■□□□ 1.28
VEGFA-208ENST00000417285 RELL2Q8NC24 303 aaPredicted RBP23.05■■□□□ 1.28
VEGFA-208ENST00000417285 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.05■■□□□ 1.282e-10■■■■■ 37.7
VEGFA-208ENST00000417285 SH3GL2Q99962 352 aa23.05■■□□□ 1.28
VEGFA-208ENST00000417285 SETD2Q9BYW2 2564 aaPredicted RBP23.04■■□□□ 1.28
VEGFA-208ENST00000417285 A0A087WV62 115 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 COQ9O75208 318 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 CTAG2O75638 210 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 NTSP30990 170 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 SRD5A2P31213 254 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 NCBP2P52298 156 aaKnown RBP eCLIP23.04■■□□□ 1.28
VEGFA-208ENST00000417285 ZNF136P52737 540 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 IKBIPQ70UQ0 350 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 KIF18BQ86Y91 864 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 SLC44A2Q8IWA5 706 aaPredicted RBP23.04■■□□□ 1.28
VEGFA-208ENST00000417285 TRIM42Q8IWZ5 723 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 HOMEZQ8IX15 550 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 ZZZ3Q8IYH5 903 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 OR7G2Q8NG99 324 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 FAM222BQ8WU58 562 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 GATA5Q9BWX5 397 aaPredicted RBP23.04■■□□□ 1.28
VEGFA-208ENST00000417285 DNAJB12Q9NXW2 375 aaKnown RBP23.04■■□□□ 1.28
VEGFA-208ENST00000417285 TAS2R10Q9NYW0 307 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 OR10H1Q9Y4A9 318 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 WIF1Q9Y5W5 379 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 MTORP42345 2549 aa23.04■■□□□ 1.28
VEGFA-208ENST00000417285 KDM4EB2RXH2 506 aaPredicted RBP23.03■■□□□ 1.28
VEGFA-208ENST00000417285 AZIN1O14977 448 aa23.03■■□□□ 1.28
VEGFA-208ENST00000417285 RGS14O43566 566 aa23.03■■□□□ 1.28
VEGFA-208ENST00000417285 SEC22BO75396 215 aa23.03■■□□□ 1.28
VEGFA-208ENST00000417285 CHEK2O96017 543 aa23.03■■□□□ 1.28
VEGFA-208ENST00000417285 PRPH2P23942 346 aa23.03■■□□□ 1.28
VEGFA-208ENST00000417285 WNT3P56703 355 aa23.03■■□□□ 1.28
VEGFA-208ENST00000417285 CYP27C1Q4G0S4 372 aa23.03■■□□□ 1.28
VEGFA-208ENST00000417285 DCST1Q5T197 706 aa23.03■■□□□ 1.28
VEGFA-208ENST00000417285 AAGABQ6PD74 315 aa23.03■■□□□ 1.28
VEGFA-208ENST00000417285 TRABD2AQ86V40 505 aa23.03■■□□□ 1.28
VEGFA-208ENST00000417285 ZFP3Q96NJ6 502 aa23.03■■□□□ 1.28
VEGFA-208ENST00000417285 UCN2Q96RP3 112 aa23.03■■□□□ 1.28
VEGFA-208ENST00000417285 TM9SF2Q99805 663 aa23.03■■□□□ 1.28
VEGFA-208ENST00000417285 EDARQ9UNE0 448 aa23.03■■□□□ 1.28
VEGFA-208ENST00000417285 C19orf53Q9UNZ5 99 aaPredicted RBP23.03■■□□□ 1.28
VEGFA-208ENST00000417285 EXPH5Q8NEV8 1989 aa23.03■■□□□ 1.28
VEGFA-208ENST00000417285 ARHGAP21Q5T5U3 1957 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 PLOD2O00469 737 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 JUNP05412 331 aaKnown RBP23.02■■□□□ 1.28
VEGFA-208ENST00000417285 CD1EP15812 388 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 GFRA1P56159 465 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 EMBQ6PCB8 327 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 NPSR1Q6W5P4 371 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 IFNEQ86WN2 208 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 BANPQ8N9N5 519 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 RNF138Q8WVD3 245 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 POLDIP3Q9BY77 421 aaKnown RBP23.02■■□□□ 1.28
VEGFA-208ENST00000417285 ROPN1BQ9BZX4 212 aaPredicted RBP23.02■■□□□ 1.28
VEGFA-208ENST00000417285 ROPN1Q9HAT0 212 aaPredicted RBP23.02■■□□□ 1.28
VEGFA-208ENST00000417285 LRTM1Q9HBL6 345 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 C1orf109Q9NX04 203 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 CRIM1Q9NZV1 1036 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 LGALS13Q9UHV8 139 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 FIS1Q9Y3D6 152 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 CCL27Q9Y4X3 112 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 ITPR3Q14573 2671 aa23.02■■□□□ 1.28
VEGFA-208ENST00000417285 NPIPB8E9PQR5 432 aa23.01■■□□□ 1.27
VEGFA-208ENST00000417285 NEFHP12036 1026 aa23.01■■□□□ 1.27
VEGFA-208ENST00000417285 EEF1A1P68104 462 aaKnown RBP23.01■■□□□ 1.27
VEGFA-208ENST00000417285 ZNF155Q12901 538 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-208ENST00000417285 FLYWCH1Q4VC44 716 aa23.01■■□□□ 1.27
VEGFA-208ENST00000417285 EEF1A1P5Q5VTE0 462 aa23.01■■□□□ 1.27
VEGFA-208ENST00000417285 RNF165Q6ZSG1 346 aa23.01■■□□□ 1.27
VEGFA-208ENST00000417285 WNT2BQ93097 391 aa23.01■■□□□ 1.27
VEGFA-208ENST00000417285 FAM111AQ96PZ2 611 aa23.01■■□□□ 1.27
VEGFA-208ENST00000417285 SDHAF3Q9NRP4 125 aa23.01■■□□□ 1.27
VEGFA-208ENST00000417285 MRTO4Q9UKD2 239 aaKnown RBP23.01■■□□□ 1.27
VEGFA-208ENST00000417285 FAM221AA4D161 298 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 H0Y3Z8 333 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 NME6O75414 186 aaPredicted RBP23■■□□□ 1.27
VEGFA-208ENST00000417285 CHMP24386 653 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 GRK2P25098 689 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 DNAJA1P31689 397 aaKnown RBP23■■□□□ 1.27
VEGFA-208ENST00000417285 MC3RP41968 323 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 PSG6Q00889 435 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 DAZAP2Q15038 168 aaPredicted RBP23■■□□□ 1.27
VEGFA-208ENST00000417285 KIAA0040Q15053 153 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 BCL2A1Q16548 175 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 PRSS53Q2L4Q9 553 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 TMEM107Q6UX40 140 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 AENQ8WTP8 325 aaKnown RBP23■■□□□ 1.27
VEGFA-208ENST00000417285 TUBA1CQ9BQE3 449 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 ACBD3Q9H3P7 528 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 GLIPR2Q9H4G4 154 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 RASSF1Q9NS23 344 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 JKAMPQ9P055 326 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 PTGDR2Q9Y5Y4 395 aa23■■□□□ 1.27
VEGFA-208ENST00000417285 TTC36A6NLP5 189 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms