RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 SNRPAP09012 282 aaKnown RBP13.41□□□□□ -0.26
RPS28-201ENST00000417088 TCEA1P23193 301 aaKnown RBP13.41□□□□□ -0.26
RPS28-201ENST00000417088 DPP4P27487 766 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 ECHS1P30084 290 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 KRT20P35900 424 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 PNLIPRP2P54317 469 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 DIO3P55073 304 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 B3GALT5-AS1P59052 145 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 EEF1A1P68104 462 aaKnown RBP13.41□□□□□ -0.26
RPS28-201ENST00000417088 BCL2A1Q16548 175 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 ERCC6LQ2NKX8 1250 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 EEF1A1P5Q5VTE0 462 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 GPRIN3Q6ZVF9 776 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 BIVMQ86UB2 503 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 SLC44A2Q8IWA5 706 aaPredicted RBP13.41□□□□□ -0.26
RPS28-201ENST00000417088 SAMD14Q8IZD0 417 aaPredicted RBP13.41□□□□□ -0.26
RPS28-201ENST00000417088 GBP7Q8N8V2 638 aaPredicted RBP13.41□□□□□ -0.26
RPS28-201ENST00000417088 OR7G2Q8NG99 324 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 OR4N2Q8NGD1 307 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 METTL6Q8TCB7 284 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 C16orf78Q8WTQ4 265 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 IFT81Q8WYA0 676 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 EFHD2Q96C19 240 aaPredicted RBP13.41□□□□□ -0.26
RPS28-201ENST00000417088 DTNBP1Q96EV8 351 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 APIPQ96GX9 242 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 ZNF382Q96SR6 550 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 FMO2Q99518 471 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 SMR3AQ99954 134 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 SLC35C2Q9NQQ7 365 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 BEX4Q9NWD9 120 aaPredicted RBP13.41□□□□□ -0.26
RPS28-201ENST00000417088 TMEM216Q9P0N5 145 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 DKKL1Q9UK85 242 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 TESMINQ9Y4I5 508 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 GNG14A0A1W2PPG7 69 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 MSTNO14793 375 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 DLX3O60479 287 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 TAC1P20366 129 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 IL12BP29460 328 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 HMOX2P30519 316 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 PSPHP78330 225 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 ACSM2AQ08AH3 577 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 FAM27E3Q08E93 113 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 HEPACAMQ14CZ8 416 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 SPIN4Q56A73 249 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 ACSM2BQ68CK6 577 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 GALNT18Q6P9A2 607 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 TIFABQ6ZNK6 161 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 CXorf67Q86X51 503 aaPredicted RBP13.4□□□□□ -0.26
RPS28-201ENST00000417088 FAM9CQ8IZT9 166 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 MMGT1Q8N4V1 131 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 STARD4Q96DR4 205 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 MTBPQ96DY7 904 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 C11orf24Q96F05 449 aaPredicted RBP13.4□□□□□ -0.26
RPS28-201ENST00000417088 C18orf12Q96KH6 178 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 TMEM237Q96Q45 408 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 GIMAP4Q9NUV9 329 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 NDRG3Q9UGV2 375 aa13.4□□□□□ -0.26
RPS28-201ENST00000417088 EIF3LQ9Y262 564 aaKnown RBP13.4□□□□□ -0.26
RPS28-201ENST00000417088 DNHD1Q96M86 4753 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 A0A087WUV0 522 aaPredicted RBP13.39□□□□□ -0.27
RPS28-201ENST00000417088 URI1O94763 535 aaPredicted RBP13.39□□□□□ -0.27
RPS28-201ENST00000417088 CRHP06850 196 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 IMPDH1P20839 514 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 TIA1P31483 386 aaKnown RBP eCLIP13.39□□□□□ -0.277e-13■■■■■ 30.1
RPS28-201ENST00000417088 MPIP34949 423 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 CPOXP36551 454 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 DSCR4P56555 118 aaPredicted RBP13.39□□□□□ -0.27
RPS28-201ENST00000417088 CLDN15P56746 228 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 NKX6-1P78426 367 aaPredicted RBP13.39□□□□□ -0.27
RPS28-201ENST00000417088 MRPS22P82650 360 aaKnown RBP13.39□□□□□ -0.27
RPS28-201ENST00000417088 PSG6Q00889 435 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 LTBQ06643 244 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 PRSS53Q2L4Q9 553 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 VWA1Q6PCB0 445 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 P4HA3Q7Z4N8 544 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 FADS6Q8N9I5 356 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 NOA1Q8NC60 698 aaKnown RBP13.39□□□□□ -0.27
RPS28-201ENST00000417088 OR2M3Q8NG83 312 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 OR4K17Q8NGC6 315 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 EBPLQ9BY08 206 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 STMN4Q9H169 189 aaPredicted RBP13.39□□□□□ -0.27
RPS28-201ENST00000417088 DSN1Q9H410 356 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 TAS2R9Q9NYW1 312 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 OR10H1Q9Y4A9 318 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 TIMM22Q9Y584 194 aa13.39□□□□□ -0.27
RPS28-201ENST00000417088 NSD1Q96L73 2696 aaPredicted RBP13.38□□□□□ -0.27
RPS28-201ENST00000417088 ARID1AO14497 2285 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 SLC22A20A6NK97 555 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 MYO1GB0I1T2 1018 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 SIAH2O43255 324 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 CTIFO43310 598 aaKnown RBP13.38□□□□□ -0.27
RPS28-201ENST00000417088 SCO2O43819 266 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 FADS1O60427 444 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 SMNDC1O75940 238 aaKnown RBP eCLIP13.38□□□□□ -0.27
RPS28-201ENST00000417088 INHBBP09529 407 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 PEPDP12955 493 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 ATP5F1P24539 256 aaPredicted RBP13.38□□□□□ -0.27
RPS28-201ENST00000417088 GCAP28676 217 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 EVI2BP34910 448 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 PCYT1AP49585 367 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms