RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CYP27C1Q4G0S4 372 aa15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 SPNS3Q6ZMD2 512 aa15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 IKBIPQ70UQ0 350 aa15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 IFNEQ86WN2 208 aa15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 ZZZ3Q8IYH5 903 aa15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 RNF138Q8WVD3 245 aa15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 DNAJB12Q9NXW2 375 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 TAS2R10Q9NYW0 307 aa15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 C19orf53Q9UNZ5 99 aaPredicted RBP15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 SMIM23A6NLE4 172 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 H0Y3Z8 333 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 SLC28A1O00337 649 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 SEC22BO75396 215 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 CTAG2O75638 210 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 PRPH2P23942 346 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 GRK2P25098 689 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 MC3RP41968 323 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 GFRA1P56159 465 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 SLC18A2Q05940 514 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 ZNF155Q12901 538 aaPredicted RBP15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 SNTB1Q13884 538 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 LIPMQ5VYY2 423 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 NOXRED1Q6NXP6 359 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 AAGABQ6PD74 315 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 KIF18BQ86Y91 864 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 HOMEZQ8IX15 550 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 OR4N2Q8NGD1 307 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 FAM222BQ8WU58 562 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 EFHD2Q96C19 240 aaPredicted RBP15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 UCN2Q96RP3 112 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 TM9SF2Q99805 663 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 TEP1Q99973 2627 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 TUBA1CQ9BQE3 449 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 GLIPR2Q9H4G4 154 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 TNFRSF12AQ9NP84 129 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 CRIM1Q9NZV1 1036 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 DKKL1Q9UK85 242 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 FBXL2Q9UKC9 423 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 KIAA1549Q9HCM3 1950 aa15.98■□□□□ 0.15
PDLIM2-208ENST00000416159 MED13LQ71F56 2210 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 NPIPB8E9PQR5 432 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 RGS14O43566 566 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 IFI6P09912 130 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 TMIGD3P0DMS9 266 aaPredicted RBP15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 KRT4P19013 534 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 CHMP24386 653 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 GAS1P54826 345 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 SRYQ05066 204 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 KIAA0040Q15053 153 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 FLYWCH1Q4VC44 716 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 SH2D4BQ5SQS7 431 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 OR5M10Q6IEU7 315 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 TMEM107Q6UX40 140 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 C9orf106Q8NAJ2 232 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 OR4K17Q8NGC6 315 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 EPS8L3Q8TE67 593 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 WNT2BQ93097 391 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 ELP4Q96EB1 424 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 SFXN2Q96NB2 322 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 ZFP3Q96NJ6 502 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 AMDHD1Q96NU7 426 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 POLDIP3Q9BY77 421 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 C12orf65Q9H3J6 166 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 SDHAF3Q9NRP4 125 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 DDX18Q9NVP1 670 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 MRTO4Q9UKD2 239 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 CBLCQ9ULV8 474 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 CCL27Q9Y4X3 112 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 CSMD2Q7Z408 3487 aa15.97■□□□□ 0.15
PDLIM2-208ENST00000416159 ANKHD1Q8IWZ3 2542 aaKnown RBP15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 FAM221AA4D161 298 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 TTC36A6NLP5 189 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 UPK1AO00322 258 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 AZIN1O14977 448 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 CD1EP15812 388 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 DPP4P27487 766 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 DNAJA1P31689 397 aaKnown RBP15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 EVI2BP34910 448 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 STARP49675 285 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 AGFG1P52594 562 aaKnown RBP15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 DGKQP52824 942 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 DSCR4P56555 118 aaPredicted RBP15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 ZNHIT3Q15649 155 aaPredicted RBP15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 DECR1Q16698 335 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 ADGRE4PQ86SQ3 457 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 C10orf107Q8IVU9 208 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 C4orf33Q8N1A6 199 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 OR2L13Q8N349 312 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 TRMOQ9BU70 441 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 L2HGDHQ9H9P8 463 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 C3orf14Q9HBI5 128 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 LRTM1Q9HBL6 345 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 Q9N2J8 555 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 RASSF1Q9NS23 344 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 C1orf109Q9NX04 203 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 JKAMPQ9P055 326 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 PPP4R1LQ9P1A2 415 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 TACC2O95359 2948 aa15.96■□□□□ 0.15
PDLIM2-208ENST00000416159 CLCA1A8K7I4 914 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 FADS1O60427 444 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms