RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ADAMTS14Q8WXS8 1223 aa14.47□□□□□ -0.09
SHMT2-202ENST00000414700 MAL2Q969L2 176 aa14.47□□□□□ -0.09
SHMT2-202ENST00000414700 CTHRC1Q96CG8 243 aa14.47□□□□□ -0.09
SHMT2-202ENST00000414700 NEURL3Q96EH8 262 aa14.47□□□□□ -0.09
SHMT2-202ENST00000414700 ALPK1Q96QP1 1244 aa14.47□□□□□ -0.09
SHMT2-202ENST00000414700 ZPBPQ9BS86 351 aa14.47□□□□□ -0.09
SHMT2-202ENST00000414700 YIPF4Q9BSR8 244 aa14.47□□□□□ -0.09
SHMT2-202ENST00000414700 EQTNQ9NQ60 294 aa14.47□□□□□ -0.09
SHMT2-202ENST00000414700 C8orf4Q9NR00 106 aa14.47□□□□□ -0.09
SHMT2-202ENST00000414700 SEMA3GQ9NS98 782 aa14.47□□□□□ -0.09
SHMT2-202ENST00000414700 PCDHGA3Q9Y5H0 932 aa14.47□□□□□ -0.09
SHMT2-202ENST00000414700 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 TCRBV16S1A1N1A0A5B0 115 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 SEC24DO94855 1032 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-202ENST00000414700 DLGAP3O95886 979 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 HMGN2P05204 90 aaKnown RBP14.46□□□□□ -0.09
SHMT2-202ENST00000414700 HSD17B1P14061 328 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 GSSP48637 474 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 EEFSECP57772 596 aaKnown RBP14.46□□□□□ -0.09
SHMT2-202ENST00000414700 ZNF846Q147U1 533 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 LASP1Q14847 261 aaKnown RBP14.46□□□□□ -0.09
SHMT2-202ENST00000414700 CYP2R1Q6VVX0 501 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 CALHM3Q86XJ0 350 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 OR2L13Q8N349 312 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 OR5D16Q8NGK9 328 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 OR13F1Q8NGS4 319 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 RIT1Q92963 219 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 GIMAP5Q96F15 307 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 C16orf58Q96GQ5 468 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 DGAT2Q96PD7 388 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 SH3GL1Q99961 368 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 KCTD14Q9BQ13 255 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-202ENST00000414700 SLC26A1Q9H2B4 701 aa14.46□□□□□ -0.09
SHMT2-202ENST00000414700 PNO1Q9NRX1 252 aaKnown RBP14.46□□□□□ -0.09
SHMT2-202ENST00000414700 NCK1P16333 377 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 S1PR1P21453 382 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 SSTR4P31391 388 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 PGDP52209 483 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 GABREP78334 506 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 DUSP8Q13202 625 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 TMEM64Q6YI46 380 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 DHFR2Q86XF0 187 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 PTOV1Q86YD1 416 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 GALNT12Q8IXK2 581 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 VWA5B2Q8N398 1253 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 TMCO5AQ8N6Q1 288 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 HORMAD2Q8N7B1 307 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 NUP43Q8NFH3 380 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 OR2T12Q8NG77 320 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 OR52N2Q8NGI0 321 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 ZNF347Q96SE7 839 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 C9orf16Q9BUW7 83 aa14.46□□□□□ -0.1
SHMT2-202ENST00000414700 IGHV3-20A0A0C4DH32 117 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 CLOCKO15516 846 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 EMC8O43402 210 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 JUNBP17275 347 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-202ENST00000414700 PCYT1AP49585 367 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 HLCSP50747 726 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 SERTAD2Q14140 314 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 KCNJ8Q15842 424 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 NEDD8Q15843 81 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 ATP6AP1Q15904 470 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 CYP51A1Q16850 503 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 TMEM164Q5U3C3 297 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 AGAP7PQ5VUJ5 663 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 EPHX4Q8IUS5 362 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 SLC7A5P1Q8MH63 180 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 ZNF675Q8TD23 568 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 RAB2BQ8WUD1 216 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 PTPMT1Q8WUK0 201 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-202ENST00000414700 RAB8BQ92930 207 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 FKBP10Q96AY3 582 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 GPN2Q9H9Y4 310 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-202ENST00000414700 ADAP2Q9NPF8 381 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 C14orf105Q9NVL8 296 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 C3orf18Q9UK00 162 aa14.45□□□□□ -0.1
SHMT2-202ENST00000414700 CEP295Q9C0D2 2601 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 PLOD3O60568 738 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 TNFRSF21O75509 655 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 KLF7O75840 302 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-202ENST00000414700 KRT75O95678 551 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 CBX7O95931 251 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 ALBP02768 609 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 HEXBP07686 556 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 PRR5P85299 388 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 VAC14Q08AM6 782 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 TUBA3CQ13748 450 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 ZNF267Q14586 743 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-202ENST00000414700 NCF4Q15080 339 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 C6orf15Q6UXA7 325 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-202ENST00000414700 TMPRSS7Q7RTY8 843 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 SERPINA11Q86U17 422 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 CACTIN-AS1Q8N1I8 211 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 ZNF321PQ8N8H1 164 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 PLPP5Q8NEB5 264 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 SFXN5Q8TD22 340 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 CYGBQ8WWM9 190 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 SLC46A1Q96NT5 459 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 CNPPD1Q9BV87 410 aa14.44□□□□□ -0.1
SHMT2-202ENST00000414700 C3orf14Q9HBI5 128 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms