RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ACPPP15309 386 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 GNA15P30679 374 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 IL24Q13007 206 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 OPCMLQ14982 345 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 TBCEQ15813 527 aaPredicted RBP4.94□□□□□ -1.62
HERC4-205ENST00000412272 ZRANB3Q5FWF4 1079 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 BEX5Q5H9J7 111 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 LANCL3Q6ZV70 420 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 TMEM200AQ86VY9 491 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 RNF130Q86XS8 419 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 ARMC10Q8N2F6 343 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 ZNF555Q8NEP9 628 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 COQ8AQ8NI60 647 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 SPPL2BQ8TCT7 592 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 CD99L2Q8TCZ2 262 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 SCARB1Q8WTV0 552 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 CCDC107Q8WV48 283 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 TM9SF4Q92544 642 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 CDS1Q92903 461 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 ZNF48Q96MX3 618 aaPredicted RBP4.94□□□□□ -1.62
HERC4-205ENST00000412272 ZNF382Q96SR6 550 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 GATA5Q9BWX5 397 aaPredicted RBP4.94□□□□□ -1.62
HERC4-205ENST00000412272 NLNQ9BYT8 704 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 AMBRA1Q9C0C7 1298 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.94□□□□□ -1.621e-6■□□□□ 10.3
HERC4-205ENST00000412272 TREX1Q9NSU2 369 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 ABCB8Q9NUT2 735 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 NSMCE4AQ9NXX6 385 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 PPIEQ9UNP9 301 aaKnown RBP4.94□□□□□ -1.62
HERC4-205ENST00000412272 USP3Q9Y6I4 520 aa4.94□□□□□ -1.62
HERC4-205ENST00000412272 DRGXA6NNA5 263 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 FZD9O00144 591 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 AIREO43918 545 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 AHSA1O95433 338 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 PRAMEF1O95521 474 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 AK1P00568 194 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 SOD2P04179 222 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 THP07101 528 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 PSAPP07602 524 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 MELTFP08582 738 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 OR56A5P0C7T3 313 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 PSMB9P28065 219 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 TEAD1P28347 426 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 MC5RP33032 325 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 AFF3P51826 1226 aaKnown RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 STXBP1P61764 594 aaKnown RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 SQSTM1Q13501 440 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 GLRA4Q5JXX5 417 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 NADSYN1Q6IA69 706 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 LRRC8EQ6NSJ5 796 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 CD300LGQ6UXG3 332 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 ZNF765Q7L2R6 523 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 SSX6Q7RTT6 188 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 PDZD3Q86UT5 571 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 OR6K3Q8NGY3 331 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 NPRL2Q8WTW4 380 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 OSTF1Q92882 214 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 MR1Q95460 341 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 CCDC115Q96NT0 180 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 TMEM47Q9BQJ4 181 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 MRPL13Q9BYD1 178 aaKnown RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 RNF167Q9H6Y7 350 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 GREM2Q9H772 168 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 LTB4R2Q9NPC1 389 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 PDGFCQ9NRA1 345 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 CLCA2Q9UQC9 943 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 DOCK5Q9H7D0 1870 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 CBY3A6NI87 242 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 PTGES3LE9PB15 166 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 NPIPA7E9PJI5 369 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 M0R296 226 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 DDNO94850 711 aaPredicted RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 NPIPA8P0DM63 369 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 HOXD8P13378 290 aaPredicted RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 CD72P21854 359 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 KDELR1P24390 212 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 AZGP1P25311 298 aaKnown RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 NNMTP40261 264 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 PXNP49023 591 aaPredicted RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 RAB5CP51148 216 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 NOVA1P51513 510 aaKnown RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 RAP1BP61224 184 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 SORDQ00796 357 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 YWHAHQ04917 246 aaPredicted RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 LIPKQ5VXJ0 399 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 PEG10Q86TG7 708 aaKnown RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 LRRC28Q86X40 367 aaPredicted RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 PTOV1Q86YD1 416 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 UBAC2Q8NBM4 344 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 THAP6Q8TBB0 222 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 HSD17B8Q92506 261 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 UCN3Q969E3 161 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 CREB3L1Q96BA8 519 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 NOL4LQ96MY1 436 aaPredicted RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 GFM1Q96RP9 751 aaKnown RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 DIRC2Q96SL1 478 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 PKMYT1Q99640 499 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 WDR55Q9H6Y2 383 aaPredicted RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 BARX1Q9HBU1 254 aaPredicted RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 ISYNA1Q9NPH2 558 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms