RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 IGSF6O95976 241 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 PGK2P07205 417 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 VCLP18206 1134 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 FCARP24071 287 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 HTR1FP30939 366 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 PMELP40967 661 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 GPC3P51654 580 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 PFN3P60673 137 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 ASIC1P78348 528 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 UBXN1Q04323 297 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 BFSP1Q12934 665 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 DPYSQ14117 519 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 EIF2B1Q14232 305 aaKnown RBP1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 KCTD19Q17RG1 926 aaPredicted RBP1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 SYCP3Q8IZU3 236 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 RDH5Q92781 318 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 P3H4Q92791 437 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 DLX4Q92988 240 aaPredicted RBP1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 NEIL2Q969S2 332 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 GPR137Q96N19 417 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 NRTNQ99748 197 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 CACNG6Q9BXT2 260 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 NLNQ9BYT8 704 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 NXF3Q9H4D5 531 aaKnown RBP1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 ZCCHC17Q9NP64 241 aaKnown RBP1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 PNPLA3Q9NST1 481 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 MARCH5Q9NX47 278 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 CNIH4Q9P003 139 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 ONECUT1Q9UBC0 465 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 TRPC4Q9UBN4 977 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 LHX3Q9UBR4 397 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 ZNF282Q9UDV7 671 aaPredicted RBP1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 TRMT6Q9UJA5 497 aaKnown RBP1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 PURGQ9UJV8 347 aaKnown RBP1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 PSG11Q9UQ72 335 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 PPIAL4AQ9Y536 164 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 CACNG2Q9Y698 323 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 USP6P35125 1406 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 PTPRUQ92729 1446 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 PCM1Q15154 2024 aa1.11□□□□□ -2.23
RNU2-54P-201ENST00000410299 PARD3Q8TEW0 1356 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 ANKRD30BQ9BXX2 1392 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 TRBV6-6A0A0A6YYG2 114 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 LRCOL1A6NCL2 159 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 E9PLD3 99 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 CHEK1O14757 476 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 TRAF3IP2O43734 574 aaPredicted RBP1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 TBL1XO60907 577 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 SFTPBP07988 381 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 GSTA1P08263 222 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 SERPINF2P08697 491 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 HIST1H2AGP0C0S8 130 aaPredicted RBP1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 CD1BP29016 333 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 NPY2RP49146 381 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 STK19P49842 368 aaPredicted RBP1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 SGSHP51688 502 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 SNU13P55769 128 aaKnown RBP1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 TIMM10P62072 90 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 OTUD4Q01804 1114 aaKnown RBP1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 EGFEM1PQ0D2K5 195 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 EIF4EBP1Q13541 118 aaPredicted RBP1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 DPYSL3Q14195 570 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 PTGES3Q15185 160 aaKnown RBP1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 RAB35Q15286 201 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 IFI44LQ53G44 452 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 NKAIN2Q5VXU1 208 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 HIST2H2AA3Q6FI13 130 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 KCTD9Q7L273 389 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 PARGQ86W56 976 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 ZNF100Q8IYN0 542 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 CHCHD4Q8N4Q1 142 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 ALLCQ8N6M5 410 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 NAT8LQ8N9F0 302 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 ANKRD49Q8WVL7 239 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 ARNTL2Q8WYA1 636 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 HIST1H2ACQ93077 130 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 MYDGFQ969H8 173 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 HAVCR1Q96D42 359 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 SLC35E1Q96K37 410 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 TSPYL1Q9H0U9 437 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 VCXQ9H320 206 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 PNO1Q9NRX1 252 aaKnown RBP1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 STARD5Q9NSY2 213 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 ZCCHC3Q9NUD5 404 aaKnown RBP1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 NARFQ9UHQ1 456 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 LCMT1Q9UIC8 334 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 NAP1L2Q9ULW6 460 aaPredicted RBP1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 ENTPD4Q9Y227 616 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 FOXA2Q9Y261 457 aaPredicted RBP1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 MRPS2Q9Y399 296 aaKnown RBP1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 L3MBTL1Q9Y468 752 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 ASTN1O14525 1302 aa1.1□□□□□ -2.23
RNU2-54P-201ENST00000410299 A0A0J9YXY3 114 aa1.09□□□□□ -2.23
RNU2-54P-201ENST00000410299 SMIM30A4D0T7 59 aa1.09□□□□□ -2.23
RNU2-54P-201ENST00000410299 LRRD1A4D1F6 860 aa1.09□□□□□ -2.23
RNU2-54P-201ENST00000410299 TUBAL3A6NHL2 446 aa1.09□□□□□ -2.23
RNU2-54P-201ENST00000410299 DHRS7CA6NNS2 312 aa1.09□□□□□ -2.23
RNU2-54P-201ENST00000410299 NPIPA2E9PIF3 369 aa1.09□□□□□ -2.23
RNU2-54P-201ENST00000410299 H3BMH7 237 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms