RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 ESRRAP11474 423 aaPredicted RBP15.32■□□□□ 0.04
SUMO1-208ENST00000409627 BMP2P12643 396 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 GPX2P18283 190 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 CRATP43155 626 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 CPA2P48052 419 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 CYB561P49447 251 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 MNAT1P51948 309 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 CASP9P55211 416 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 POU6F2P78424 691 aaPredicted RBP15.32■□□□□ 0.04
SUMO1-208ENST00000409627 MRPS22P82650 360 aaKnown RBP15.32■□□□□ 0.04
SUMO1-208ENST00000409627 ART3Q13508 389 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 TUBA3CQ13748 450 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 RGNQ15493 299 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 NTRK2Q16620 822 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 DECR1Q16698 335 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 ZNF791Q3KP31 576 aaPredicted RBP15.32■□□□□ 0.04
SUMO1-208ENST00000409627 ZNF468Q5VIY5 522 aaPredicted RBP15.32■□□□□ 0.04
SUMO1-208ENST00000409627 NANOGP8Q6NSW7 305 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 TUBA3EQ6PEY2 450 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 PRR22Q8IZ63 422 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 BCORP1Q8N888 145 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 OR8J3Q8NGG0 315 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 C9orf43Q8TAL5 461 aaPredicted RBP15.32■□□□□ 0.04
SUMO1-208ENST00000409627 FAM110BQ8TC76 370 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 RMND5BQ96G75 393 aaPredicted RBP15.32■□□□□ 0.04
SUMO1-208ENST00000409627 SH3GL1Q99961 368 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 HOPXQ9BPY8 73 aaPredicted RBP15.32■□□□□ 0.04
SUMO1-208ENST00000409627 GPATCH1Q9BRR8 931 aaKnown RBP15.32■□□□□ 0.04
SUMO1-208ENST00000409627 SLC39A3Q9BRY0 314 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 IKZF5Q9H5V7 419 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 NANOGQ9H9S0 305 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 EXD2Q9NVH0 621 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 HPF1Q9NWY4 346 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 THUMPD1Q9NXG2 353 aaKnown RBP15.32■□□□□ 0.04
SUMO1-208ENST00000409627 TP53TG5Q9Y2B4 290 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 KCNE3Q9Y6H6 103 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 MGAQ8IWI9 3026 aa15.32■□□□□ 0.04
SUMO1-208ENST00000409627 C15orf38-AP3S2A0A0A6YYH1 394 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 OR6C70A6NIJ9 312 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 TSPAN2O60636 221 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 ABCB7O75027 752 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 KCNK2O95069 426 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 IL33O95760 270 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 PDGFAP04085 211 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 ETFAP13804 333 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 CALB2P22676 271 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 KRT20P35900 424 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 CD96P40200 585 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 PNLIPRP2P54317 469 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 PSMD4P55036 377 aaKnown RBP15.31■□□□□ 0.04
SUMO1-208ENST00000409627 MTPNP58546 118 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 DSTNP60981 165 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 ARG2P78540 354 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 ATAD3BQ5T9A4 648 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 HEPHL1Q6MZM0 1159 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 C8orf82Q6P1X6 216 aaPredicted RBP15.31■□□□□ 0.04
SUMO1-208ENST00000409627 ARPINQ7Z6K5 226 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 CYP4Z2PQ8N1L4 340 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 CHDHQ8NE62 594 aaPredicted RBP15.31■□□□□ 0.04
SUMO1-208ENST00000409627 DIO2Q92813 273 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 RAB8BQ92930 207 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 WBP1Q96G27 269 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 SGCZQ96LD1 299 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 PLA2G3Q9NZ20 509 aa15.31■□□□□ 0.04
SUMO1-208ENST00000409627 DSPP15924 2871 aaKnown RBP15.3■□□□□ 0.04
SUMO1-208ENST00000409627 K7EM74 188 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 TNFRSF21O75509 655 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 REM1O75628 298 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 UBOX5O94941 541 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 SFTPCP11686 197 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 SLC6A2P23975 617 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 IL12BP29460 328 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 OC90Q02509 493 aaPredicted RBP15.3■□□□□ 0.04
SUMO1-208ENST00000409627 EFR3AQ14156 821 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 SELPLGQ14242 412 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.3■□□□□ 0.04
SUMO1-208ENST00000409627 ARHGAP11BQ3KRB8 267 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 LACTB2Q53H82 288 aaPredicted RBP15.3■□□□□ 0.04
SUMO1-208ENST00000409627 DCST2Q5T1A1 773 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 IL20RBQ6UXL0 311 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 RTL4Q6ZR62 310 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 NUP54Q7Z3B4 507 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 ZADH2Q8N4Q0 377 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 EXD3Q8N9H8 876 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 GOLM1Q8NBJ4 401 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 MDS2Q8NDY4 140 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 XAGE5Q8WWM1 108 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 COL21A1Q96P44 957 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 G6PC3Q9BUM1 346 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 THUMPD3Q9BV44 507 aaKnown RBP15.3■□□□□ 0.04
SUMO1-208ENST00000409627 TRIM8Q9BZR9 551 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 KAT8Q9H7Z6 458 aaKnown RBP15.3■□□□□ 0.04
SUMO1-208ENST00000409627 ANKRD10Q9NXR5 420 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 LRFN1Q9P244 771 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 LIPT1Q9Y234 373 aa15.3■□□□□ 0.04
SUMO1-208ENST00000409627 CACNA1GO43497 2377 aa15.29■□□□□ 0.04
SUMO1-208ENST00000409627 TP53I11O14683 189 aa15.29■□□□□ 0.04
SUMO1-208ENST00000409627 DPM1O60762 260 aa15.29■□□□□ 0.04
SUMO1-208ENST00000409627 NEURL1O76050 574 aa15.29■□□□□ 0.04
SUMO1-208ENST00000409627 F10P00742 488 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms