RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 CAMK4Q16566 473 aa2.74□□□□□ -1.97
PMS1-203ENST00000409593 SBK1Q52WX2 424 aa2.74□□□□□ -1.97
PMS1-203ENST00000409593 LIPKQ5VXJ0 399 aa2.74□□□□□ -1.97
PMS1-203ENST00000409593 PNCKQ6P2M8 343 aa2.74□□□□□ -1.97
PMS1-203ENST00000409593 IGFL2Q6UWQ7 119 aa2.74□□□□□ -1.97
PMS1-203ENST00000409593 TIFABQ6ZNK6 161 aa2.74□□□□□ -1.97
PMS1-203ENST00000409593 YRDCQ86U90 279 aaKnown RBP2.74□□□□□ -1.97
PMS1-203ENST00000409593 C9orf40Q8IXQ3 194 aa2.74□□□□□ -1.97
PMS1-203ENST00000409593 MARC2Q969Z3 335 aa2.74□□□□□ -1.97
PMS1-203ENST00000409593 VMP1Q96GC9 406 aa2.74□□□□□ -1.97
PMS1-203ENST00000409593 CARD6Q9BX69 1037 aa2.74□□□□□ -1.97
PMS1-203ENST00000409593 FAM124BQ9H5Z6 455 aaPredicted RBP2.74□□□□□ -1.97
PMS1-203ENST00000409593 MEPEQ9NQ76 525 aaPredicted RBP2.74□□□□□ -1.97
PMS1-203ENST00000409593 FAM114A2Q9NRY5 505 aa2.74□□□□□ -1.97
PMS1-203ENST00000409593 ARGLU1Q9NWB6 273 aaPredicted RBP2.74□□□□□ -1.97
PMS1-203ENST00000409593 CXCL14O95715 111 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 IGHV3-23P01764 117 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 PROS1P07225 676 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 CYP11B1P15538 503 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 HNRNPFP52597 415 aaKnown RBP2.73□□□□□ -1.97
PMS1-203ENST00000409593 UCNP55089 124 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 RIPPLY3P57055 190 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 BCL2L1Q07817 233 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 PSG7Q13046 419 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 ZNF699Q32M78 642 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 ZNF528Q3MIS6 628 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 BEND6Q5SZJ8 279 aaPredicted RBP2.73□□□□□ -1.97
PMS1-203ENST00000409593 DMKNQ6E0U4 476 aaPredicted RBP2.73□□□□□ -1.97
PMS1-203ENST00000409593 UFSP1Q6NVU6 142 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 DLEU7Q6UYE1 221 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 TMEM179BQ7Z7N9 219 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 AMZ2Q86W34 360 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 RNF175Q8N4F7 328 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 PHYHIPQ92561 330 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 ABCG8Q9H221 673 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 CARD9Q9H257 536 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 EHD1Q9H4M9 534 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 COMMD8Q9NX08 183 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 FZR1Q9UM11 496 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 PTPRUQ92729 1446 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 OR7A17O14581 309 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 ZNF861PO60384 105 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 STK17BO94768 372 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 PGK2P07205 417 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 IGFBP1P08833 259 aaPredicted RBP2.73□□□□□ -1.97
PMS1-203ENST00000409593 SSTP61278 116 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 GNB2P62879 340 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 KRT83P78385 493 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 IL9RQ01113 521 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 ERI1Q8IV48 349 aaKnown RBP2.73□□□□□ -1.97
PMS1-203ENST00000409593 PEX5LQ8IYB4 626 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 LRRC17Q8N6Y2 441 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 ZNF397Q8NF99 534 aaPredicted RBP2.73□□□□□ -1.97
PMS1-203ENST00000409593 OR10H4Q8NGA5 316 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 ELSPBP1Q96BH3 223 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 TADA1Q96BN2 335 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 NAP1L3Q99457 506 aaPredicted RBP2.73□□□□□ -1.97
PMS1-203ENST00000409593 TEX13AQ9BXU3 409 aaPredicted RBP2.73□□□□□ -1.97
PMS1-203ENST00000409593 NACA2Q9H009 215 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 DDX47Q9H0S4 455 aaKnown RBP2.73□□□□□ -1.97
PMS1-203ENST00000409593 Q9H3A6 140 aa2.73□□□□□ -1.97
PMS1-203ENST00000409593 TMEM89A2RUT3 159 aa2.72□□□□□ -1.97
PMS1-203ENST00000409593 ZNF254O75437 659 aa2.72□□□□□ -1.97
PMS1-203ENST00000409593 HOXC4P09017 264 aaPredicted RBP2.72□□□□□ -1.97
PMS1-203ENST00000409593 MAGEA4P43358 317 aa2.72□□□□□ -1.97
PMS1-203ENST00000409593 SRYQ05066 204 aa2.72□□□□□ -1.97
PMS1-203ENST00000409593 HFEQ30201 348 aa2.72□□□□□ -1.97
PMS1-203ENST00000409593 OTPQ5XKR4 325 aa2.72□□□□□ -1.97
PMS1-203ENST00000409593 ZNF57Q68EA5 555 aaPredicted RBP2.72□□□□□ -1.97
PMS1-203ENST00000409593 P4HA3Q7Z4N8 544 aa2.72□□□□□ -1.97
PMS1-203ENST00000409593 CSNK1A1LQ8N752 337 aa2.72□□□□□ -1.97
PMS1-203ENST00000409593 ADAMTS16Q8TE57 1224 aa2.72□□□□□ -1.97
PMS1-203ENST00000409593 SNX21Q969T3 373 aa2.72□□□□□ -1.97
PMS1-203ENST00000409593 ZNF184Q99676 751 aaPredicted RBP2.72□□□□□ -1.97
PMS1-203ENST00000409593 CBWD1Q9BRT8 395 aa2.72□□□□□ -1.97
PMS1-203ENST00000409593 PTGES2Q9H7Z7 377 aa2.72□□□□□ -1.97
PMS1-203ENST00000409593 PRMT8Q9NR22 394 aaPredicted RBP2.72□□□□□ -1.97
PMS1-203ENST00000409593 RAI1Q7Z5J4 1906 aaPredicted RBP2.71□□□□□ -1.98
PMS1-203ENST00000409593 FAM170AA1A519 330 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 TRIM49D1C9J1S8 452 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 PANO1I0J062 215 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 LATO43561 262 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 ABHD2P08910 425 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 FUT3P21217 361 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 COPB2P35606 906 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 SRP54P61011 504 aaKnown RBP2.71□□□□□ -1.98
PMS1-203ENST00000409593 RPS6P62753 249 aaKnown RBP2.71□□□□□ -1.98
PMS1-203ENST00000409593 RPL32P62910 135 aaKnown RBP2.71□□□□□ -1.98
PMS1-203ENST00000409593 ARF5P84085 180 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 UBXN1Q04323 297 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 HERPUD1Q15011 391 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 PRR4Q16378 134 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 PARP6Q2NL67 630 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 SPATA46Q5T0L3 261 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 SLX4IPQ5VYV7 408 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 GOLGA7Q7Z5G4 137 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 UNC45BQ8IWX7 931 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 KRT35Q92764 455 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 EEF2KMTQ96G04 330 aa2.71□□□□□ -1.98
PMS1-203ENST00000409593 CNPY3Q9BT09 278 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms