RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 MTNR1BP49286 362 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 TTPAP49638 278 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 STARP49675 285 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 TAF6P49848 677 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 MECP2P51608 486 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 TSPAN5P62079 268 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 DCDP81605 110 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 CRYZQ08257 329 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 TWF1Q12792 350 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 RAB40BQ12829 278 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 HTR4Q13639 388 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 PTPRCAPQ14761 206 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 TAF1AQ15573 450 aaPredicted RBP10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 ST3GAL2Q16842 350 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 SLC36A2Q495M3 483 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 CRTC2Q53ET0 693 aaPredicted RBP10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 TCTE1Q5JU00 501 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 METTL11BQ5VVY1 283 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 DHRS7BQ6IAN0 325 aaPredicted RBP10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 LIN54Q6MZP7 749 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 CD300LDQ6UXZ3 194 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 TMEM91Q6ZNR0 172 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 C17orf107Q6ZR85 190 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 BHLHA9Q7RTU4 235 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 KANSL1Q7Z3B3 1105 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 CAMKMTQ7Z624 323 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 SPNS2Q8IVW8 549 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 SLC30A8Q8IWU4 369 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 NPAS3Q8IXF0 933 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 ZNF485Q8NCK3 441 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 OR1S1Q8NH92 325 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 CDC26Q8NHZ8 85 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 ARRDC2Q8TBH0 407 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 CSGALNACT1Q8TDX6 532 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 SFT2D1Q8WV19 159 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 GEMIN6Q8WXD5 167 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 TCEAL3Q969E4 200 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 C1GALT1C1Q96EU7 318 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 SLC6A18Q96N87 628 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 CDK15Q96Q40 435 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 PKMYT1Q99640 499 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 ARHGAP9Q9BRR9 750 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 IER2Q9BTL4 223 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 PTDSS2Q9BVG9 487 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 CINPQ9BW66 212 aaPredicted RBP10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 TSSK6Q9BXA6 273 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 SEMA4CQ9C0C4 833 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 EVA1AQ9H8M9 152 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 AFF4Q9UHB7 1163 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 FBXL3Q9UKT7 428 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 PPT2Q9UMR5 302 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 CA5BQ9Y2D0 317 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 YIPF1Q9Y548 306 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 ENPP4Q9Y6X5 453 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 OBSL1O75147 1896 aa10.02□□□□□ -0.81
NIF3L1-204ENST00000409357 A0A1B0GUH1 482 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 MTMR11A4FU01 709 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 ANKRD61A6NGH8 418 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 C2orf81A6NN90 581 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 HNRNPCL2B2RXH8 293 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 ANHXE9PGG2 379 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 WWP2O00308 870 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 FPGTO14772 594 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 RP2O75695 350 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 EGFP01133 1207 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 LRG1P02750 347 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 POU2F2P09086 479 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 FOLR2P14207 255 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 GJA1P17302 382 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 CD53P19397 219 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 LMO2P25791 158 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 SPAM1P38567 509 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 CD86P42081 329 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 MMP15P51511 669 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 GAS1P54826 345 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 CTBP2P56545 445 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 WNT3P56703 355 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 ZP1P60852 638 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 PITPNAQ00169 270 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 SPIBQ01892 262 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 TAP2Q03519 686 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 DUSP4Q13115 394 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 PLD1Q13393 1074 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 TDGQ13569 410 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 LRRC32Q14392 662 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 PUM1Q14671 1186 aaKnown RBP eCLIP10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 HLXQ14774 488 aaPredicted RBP10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 SEC23BQ15437 767 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 SWI5Q1ZZU3 235 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 SV2CQ496J9 727 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 DGKKQ5KSL6 1271 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 FAM69AQ5T7M9 428 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 MARC1Q5VT66 337 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 TPGS2Q68CL5 300 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 IL31Q6EBC2 164 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 SLC30A6Q6NXT4 461 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 ATRAIDQ6UW56 229 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 TRMT11Q7Z4G4 463 aaKnown RBP10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 GPR26Q8NDV2 337 aa10.01□□□□□ -0.81
NIF3L1-204ENST00000409357 OR52I1Q8NGK6 324 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms