RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 HMBOX1Q6NT76 420 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 METTL2BQ6P1Q9 378 aaKnown RBP7.01□□□□□ -1.29
LSM5-202ENST00000409292 LRRC8AQ8IWT6 810 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 KLHL7Q8IXQ5 586 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 UBQLNLQ8IYU4 475 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 CIARTQ8N365 385 aaPredicted RBP7.01□□□□□ -1.29
LSM5-202ENST00000409292 ZNF615Q8N8J6 731 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 ADIPOR1Q96A54 375 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 TACO1Q9BSH4 297 aaKnown RBP7.01□□□□□ -1.29
LSM5-202ENST00000409292 TRIM31Q9BZY9 425 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 KLHL4Q9C0H6 718 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 ELOVL6Q9H5J4 265 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 CAB39LQ9H9S4 337 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 PAQR5Q9NXK6 330 aaPredicted RBP7.01□□□□□ -1.29
LSM5-202ENST00000409292 SENP1Q9P0U3 644 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 PPP4R1LQ9P1A2 415 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 CLCF1Q9UBD9 225 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 MRTO4Q9UKD2 239 aaKnown RBP7.01□□□□□ -1.29
LSM5-202ENST00000409292 SNX12Q9UMY4 172 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 ACOT9Q9Y305 439 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 ZNF175Q9Y473 711 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 WIF1Q9Y5W5 379 aa7.01□□□□□ -1.29
LSM5-202ENST00000409292 MAP1AP78559 2803 aaPredicted RBP7□□□□□ -1.29
LSM5-202ENST00000409292 FBN3Q75N90 2809 aa7□□□□□ -1.29
LSM5-202ENST00000409292 DSCAMO60469 2012 aa7□□□□□ -1.29
LSM5-202ENST00000409292 A0A087X1B8 175 aa7□□□□□ -1.29
LSM5-202ENST00000409292 TNFSF12-TNFSF13A0A0A6YY99 330 aa7□□□□□ -1.29
LSM5-202ENST00000409292 SCO2A0A1W2PP80 73 aa7□□□□□ -1.29
LSM5-202ENST00000409292 FRG2CA6NGY1 282 aa7□□□□□ -1.29
LSM5-202ENST00000409292 DEFB108AA8MXU0 73 aa7□□□□□ -1.29
LSM5-202ENST00000409292 CCDC188H7C350 402 aa7□□□□□ -1.29
LSM5-202ENST00000409292 UBXN8O00124 270 aa7□□□□□ -1.29
LSM5-202ENST00000409292 EIF3HO15372 352 aaKnown RBP eCLIP7□□□□□ -1.29
LSM5-202ENST00000409292 HCRTR2O43614 444 aa7□□□□□ -1.29
LSM5-202ENST00000409292 TLX2O43763 284 aaPredicted RBP7□□□□□ -1.29
LSM5-202ENST00000409292 TMPRSS11DO60235 418 aa7□□□□□ -1.29
LSM5-202ENST00000409292 TNFRSF21O75509 655 aa7□□□□□ -1.29
LSM5-202ENST00000409292 EEDO75530 441 aaKnown RBP7□□□□□ -1.29
LSM5-202ENST00000409292 TNFSF13O75888 250 aa7□□□□□ -1.29
LSM5-202ENST00000409292 SEC31AO94979 1220 aaKnown RBP7□□□□□ -1.29
LSM5-202ENST00000409292 GHRHP01286 108 aa7□□□□□ -1.29
LSM5-202ENST00000409292 KLK1P06870 262 aa7□□□□□ -1.29
LSM5-202ENST00000409292 ZNF708P17019 499 aa7□□□□□ -1.29
LSM5-202ENST00000409292 EPORP19235 508 aa7□□□□□ -1.29
LSM5-202ENST00000409292 CNTFP26441 200 aa7□□□□□ -1.29
LSM5-202ENST00000409292 STARP49675 285 aa7□□□□□ -1.29
LSM5-202ENST00000409292 ALDH18A1P54886 795 aaKnown RBP7□□□□□ -1.29
LSM5-202ENST00000409292 PSMD4P55036 377 aaKnown RBP7□□□□□ -1.29
LSM5-202ENST00000409292 DSCR4P56555 118 aaPredicted RBP7□□□□□ -1.29
LSM5-202ENST00000409292 RPS4XP62701 263 aaKnown RBP7□□□□□ -1.29
LSM5-202ENST00000409292 HMGCS1Q01581 520 aa7□□□□□ -1.29
LSM5-202ENST00000409292 NAB1Q13506 487 aa7□□□□□ -1.29
LSM5-202ENST00000409292 GTF2H2Q13888 395 aa7□□□□□ -1.29
LSM5-202ENST00000409292 GANABQ14697 944 aaKnown RBP7□□□□□ -1.29
LSM5-202ENST00000409292 ZKSCAN8Q15776 578 aaPredicted RBP7□□□□□ -1.29
LSM5-202ENST00000409292 OCLNQ16625 522 aa7□□□□□ -1.29
LSM5-202ENST00000409292 PFKFB4Q16877 469 aa7□□□□□ -1.29
LSM5-202ENST00000409292 RAET1LQ5VY80 246 aa7□□□□□ -1.29
LSM5-202ENST00000409292 PPP4R4Q6NUP7 873 aa7□□□□□ -1.29
LSM5-202ENST00000409292 GTF2H2CQ6P1K8 395 aa7□□□□□ -1.29
LSM5-202ENST00000409292 ZNF704Q6ZNC4 412 aaPredicted RBP7□□□□□ -1.29
LSM5-202ENST00000409292 C3orf62Q6ZUJ4 267 aa7□□□□□ -1.29
LSM5-202ENST00000409292 ADGRE4PQ86SQ3 457 aa7□□□□□ -1.29
LSM5-202ENST00000409292 RHEBL1Q8TAI7 183 aa7□□□□□ -1.29
LSM5-202ENST00000409292 TRPC4APQ8TEL6 797 aa7□□□□□ -1.29
LSM5-202ENST00000409292 HGDQ93099 445 aa7□□□□□ -1.29
LSM5-202ENST00000409292 KLHL29Q96CT2 875 aa7□□□□□ -1.29
LSM5-202ENST00000409292 ERP27Q96DN0 273 aa7□□□□□ -1.29
LSM5-202ENST00000409292 STARD4Q96DR4 205 aa7□□□□□ -1.29
LSM5-202ENST00000409292 UBXN10Q96LJ8 280 aa7□□□□□ -1.29
LSM5-202ENST00000409292 NODALQ96S42 347 aa7□□□□□ -1.29
LSM5-202ENST00000409292 ITPAQ9BY32 194 aa7□□□□□ -1.29
LSM5-202ENST00000409292 AMBRA1Q9C0C7 1298 aa7□□□□□ -1.29
LSM5-202ENST00000409292 IPPKQ9H8X2 491 aa7□□□□□ -1.29
LSM5-202ENST00000409292 GALNT9Q9HCQ5 603 aa7□□□□□ -1.29
LSM5-202ENST00000409292 SRA1Q9HD15 236 aaKnown RBP7□□□□□ -1.29
LSM5-202ENST00000409292 SMYD2Q9NRG4 433 aa7□□□□□ -1.29
LSM5-202ENST00000409292 TMCO1Q9UM00 188 aa7□□□□□ -1.29
LSM5-202ENST00000409292 OR10H1Q9Y4A9 318 aa7□□□□□ -1.29
LSM5-202ENST00000409292 TLN2Q9Y4G6 2542 aa7□□□□□ -1.29
LSM5-202ENST00000409292 A0A1W2PPR1 153 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 E7ESA3 106 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 PGRMC2O15173 223 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 TO15178 435 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 UGT2B11O75310 529 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 SYNGR4O95473 234 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 GBAP04062 536 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 CLPSP04118 112 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 ATP1B1P05026 303 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 CT62P0C5K7 136 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 PAX1P15863 534 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 HK1P19367 917 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 TCEA1P23193 301 aaKnown RBP6.99□□□□□ -1.29
LSM5-202ENST00000409292 GRK2P25098 689 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 SSTR1P30872 391 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 STX2P32856 288 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 FEN1P39748 380 aaKnown RBP6.99□□□□□ -1.29
LSM5-202ENST00000409292 ALDH9A1P49189 494 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 LHX2P50458 406 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 CCNG1P51959 295 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms