RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 RELL1Q8IUW5 271 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 HOMEZQ8IX15 550 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 CCDC116Q8IYX3 515 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 C1orf52Q8N6N3 182 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 ZNF675Q8TD23 568 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 SMPDL3BQ92485 455 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 DTNBP1Q96EV8 351 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 SLC35A4Q96G79 324 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 BTBD9Q96Q07 612 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 ADOQ96SZ5 270 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 MRPL57Q9BQC6 102 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 G6PC3Q9BUM1 346 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 C1QTNF3Q9BXJ4 246 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 MRPL46Q9H2W6 279 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 ACBD3Q9H3P7 528 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 BEX4Q9NWD9 120 aaPredicted RBP8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 CLCF1Q9UBD9 225 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 HEY2Q9UBP5 337 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 VPS29Q9UBQ0 182 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 NDRG3Q9UGV2 375 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 ZNF225Q9UK10 706 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 FBXL2Q9UKC9 423 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 UTS2RQ9UKP6 389 aa8.31□□□□□ -1.08
NIF3L1-203ENST00000409129 ANK2Q01484 3957 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 EXPH5Q8NEV8 1989 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 A0A1W2PPR1 153 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 MANBAO00462 879 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 LCE2BO14633 110 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 SMAD7O15105 426 aaKnown RBP8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 ZIC3O60481 467 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 TSPAN2O60636 221 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 LILRA1O75019 489 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 OR4F21O95013 312 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 ESRRBO95718 433 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 TGM6O95932 706 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 SBK3P0C264 359 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 CT45A8P0DMV1 189 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 CT45A9P0DMV2 189 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 HSD3B1P14060 373 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 ZNF708P17019 499 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 HSD3B2P26439 372 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 HSD17B3P37058 310 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 CLDN18P56856 261 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 PSPHP78330 225 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 NKX6-1P78426 367 aaPredicted RBP8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 PRR20EP86478 221 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 PRR20CP86479 221 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 PRR20DP86480 221 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 PRR20BP86481 221 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 PRR20AP86496 221 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 EFR3AQ14156 821 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 BCL2A1Q16548 175 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 CT45A2Q5DJT8 189 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 ZNF628Q5EBL2 1059 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 OR5M10Q6IEU7 315 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 C8orf74Q6P047 294 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 LARP4Q71RC2 724 aaKnown RBP eCLIP8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 GRAMD2AQ8IUY3 354 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 GCNT2Q8N0V5 402 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 TMEM151AQ8N4L1 468 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 KAT2AQ92830 837 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 ERP27Q96DN0 273 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 SFXN2Q96NB2 322 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 HBEGFQ99075 208 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 PAFAH2Q99487 392 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 ANKRA2Q9H9E1 313 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 PFDN4Q9NQP4 134 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 TRPS1Q9UHF7 1281 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 MCM8Q9UJA3 840 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 PACSIN3Q9UKS6 424 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 EIF3LQ9Y262 564 aaKnown RBP8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 DLGAP4Q9Y2H0 992 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 WIF1Q9Y5W5 379 aa8.3□□□□□ -1.08
NIF3L1-203ENST00000409129 DOCK7Q96N67 2140 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 A0A1W2PNV4 684 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 A8MT66 165 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 TRIM49D1C9J1S8 452 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 POC1B-GALNT4F8VUJ3 575 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 H7C1Q1 480 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 MSTNO14793 375 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 HCRTR2O43614 444 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 ULK1O75385 1050 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 NME6O75414 186 aaPredicted RBP8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 TNFSF13O75888 250 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 KRT6AP02538 564 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 KRT6BP04259 564 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 CRHP06850 196 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 IL3P08700 152 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 GRK2P25098 689 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 DPP4P27487 766 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 IL12BP29460 328 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 KRT20P35900 424 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 KRT6CP48668 564 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 PNLIPRP2P54317 469 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 GAS1P54826 345 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 DSCR4P56555 118 aaPredicted RBP8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 CORO7P57737 925 aa8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 RAE1P78406 368 aaKnown RBP8.29□□□□□ -1.08
NIF3L1-203ENST00000409129 CLCQ05315 142 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms