RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 TSSK4Q6SA08 328 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 KLHL17Q6TDP4 642 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 METTL27Q8N6F8 245 aaPredicted RBP3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 OR52P1PQ8NH57 321 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 TANKQ92844 425 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 C12orf43Q96C57 262 aaKnown RBP3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 PEX11GQ96HA9 241 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 MS4A4EQ96PG1 132 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 TRNT1Q96Q11 434 aaKnown RBP3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 DCUN1D5Q9BTE7 237 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 BTBD2Q9BX70 525 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 PINK1Q9BXM7 581 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 LHPPQ9H008 270 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 ZFAND3Q9H8U3 227 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 IMPAD1Q9NX62 359 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 CALML5Q9NZT1 146 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 SLC6A14Q9UN76 642 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 A4GNTQ9UNA3 340 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 SIT1Q9Y3P8 196 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 WDR45Q9Y484 360 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 LRP4O75096 1905 aa3.72□□□□□ -1.81
LRRTM4-201ENST00000409088 COL6A3P12111 3177 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 IGHV5-51A0A0C4DH38 117 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 CLDN24A6NM45 220 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 CPSF4LA6NMK7 179 aaKnown RBP3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 BCAT2O15382 392 aaPredicted RBP3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 OR10H2O60403 315 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 SRPX2O60687 465 aaPredicted RBP3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 INMTO95050 263 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 MED26O95402 600 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 ZBTB11O95625 1053 aaPredicted RBP3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 CPNE6O95741 557 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 IGFBP1P08833 259 aaPredicted RBP3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 CT62P0C5K7 136 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 ACP2P11117 423 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 MYF5P13349 255 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 NR4A1P22736 598 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 CHMP24386 653 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 MAP2K4P45985 399 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 RFX3P48380 749 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 SEPHS1P49903 392 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 CRISP1P54107 249 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 SMIM11AP58511 58 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 CXCR4P61073 352 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 SLC35A2P78381 396 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 EMX1Q04741 257 aaPredicted RBP3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 ZP2Q05996 745 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 SLC13A2Q13183 592 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 SYT16Q17RD7 645 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 AMZ1Q400G9 498 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 ZNF628Q5EBL2 1059 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 SNAP47Q5SQN1 464 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 ZNF770Q6IQ21 691 aaPredicted RBP3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 PODNL1Q6PEZ8 512 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 AHSA2Q719I0 299 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 MEX3DQ86XN8 651 aaKnown RBP3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 OR2L13Q8N349 312 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 CLIP4Q8N3C7 705 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 DNAJC22Q8N4W6 341 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 APH1BQ8WW43 257 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 PIK3R3Q92569 461 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 ZNF566Q969W8 418 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 ANKRD9Q96BM1 317 aaPredicted RBP3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 TCTN2Q96GX1 697 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 AHCYL2Q96HN2 611 aaKnown RBP3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 GUCD1Q96NT3 240 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 PCED1AQ9H1Q7 454 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 DUSP21Q9H596 190 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 KLHL28Q9NXS3 571 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 PTGFRNQ9P2B2 879 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 LRIT1Q9P2V4 623 aa3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 C19orf53Q9UNZ5 99 aaPredicted RBP3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 GPR55Q9Y2T6 319 aaPredicted RBP3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 HEMK1Q9Y5R4 338 aaPredicted RBP3.71□□□□□ -1.81
LRRTM4-201ENST00000409088 NPIPA5A0A0B4J1W7 369 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 A0A1B0GVT2 93 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 LILRA5A6NI73 299 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 NPIPA7E9PJI5 369 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 TMX2-CTNND1H3BSU7 103 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 FAAHO00519 579 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 CASC3O15234 703 aaKnown RBP3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 FOXS1O43638 330 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 NOL3O60936 208 aaKnown RBP3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 PIAS2O75928 621 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 SEC14L2O76054 403 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 ATE1O95260 518 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 FADS2O95864 444 aaKnown RBP3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 AGR2O95994 175 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 MT-ND2P03891 347 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 ATP1B1P05026 303 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 ALOX5P09917 674 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 NPIPA8P0DM63 369 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 JUNBP17275 347 aaPredicted RBP3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 TNNI3P19429 210 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 CNR2P34972 360 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 MAP2K3P46734 347 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 UGT2B15P54855 530 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 RAB38P57729 211 aa3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 RGS8P57771 180 aaPredicted RBP3.71□□□□□ -1.82
LRRTM4-201ENST00000409088 OR1D5P58170 312 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms