RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 BCORP1Q8N888 145 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 ICA1LQ8NDH6 482 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 OR8K3Q8NH51 312 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 GOT1L1Q8NHS2 421 aaPredicted RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 M1APQ8TC57 530 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 ELP5Q8TE02 316 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 GAL3ST3Q96A11 431 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 QRFPRQ96P65 431 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 F2RL3Q96RI0 385 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 LPAR4Q99677 370 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 C1orf50Q9BV19 199 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 SORBS1Q9BX66 1292 aaKnown RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 CD244Q9BZW8 370 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 REXO4Q9GZR2 422 aaKnown RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 RNF32Q9H0A6 362 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 TSPAN10Q9H1Z9 355 aaPredicted RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 CDCP1Q9H5V8 836 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 EXTL2Q9UBQ6 330 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 ZNF223Q9UK11 482 aaPredicted RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 DIDO1Q9BTC0 2240 aaKnown RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 SAGE2PA6NJ88 616 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 DBX1A6NMT0 343 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 SUPT3HB4E1H0 165 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 SAP18O00422 153 aaKnown RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 GYG2O15488 501 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 DYRK3O43781 588 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 PRKNO60260 465 aaPredicted RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 KERAO60938 352 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 NOS1APO75052 506 aaPredicted RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 NEURL1O76050 574 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 SLITRK5O94991 958 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 SNX4O95219 450 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 ALDOAP04075 364 aaKnown RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 FAM58BPP0C7Q3 252 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 RNH1P13489 461 aaKnown RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 HK2P52789 917 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 CHIT1Q13231 466 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 OR1C1Q15619 314 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 ADPRMQ3LIE5 342 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 C4orf17Q53FE4 359 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 ZNF766Q5HY98 468 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 ZNF787Q6DD87 383 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 ABHD17CQ6PCB6 329 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 RGS9BPQ6ZS82 235 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 DHDDSQ86SQ9 333 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 MDS2Q8NDY4 140 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 THAP3Q8WTV1 239 aaPredicted RBP9□□□□□ -0.97
NIF3L1-202ENST00000409020 NR4A3Q92570 626 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 WDR34Q96EX3 536 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 ZNF354BQ96LW1 612 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 C5orf34Q96MH7 638 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 BBS4Q96RK4 519 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 PRDM9Q9NQV7 894 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 SNX15Q9NRS6 342 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 ZNF358Q9NW07 568 aa9□□□□□ -0.97
NIF3L1-202ENST00000409020 ZGRF1Q86YA3 2104 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 URADA6NGE7 173 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 GABRR3A8MPY1 467 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 PSMD12O00232 456 aaPredicted RBP8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 H2AFYO75367 372 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 CLEC3AO75596 197 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 RASAL1O95294 804 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 ACSL3O95573 720 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 SNAP29O95721 258 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 C2P06681 752 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 LTA4HP09960 611 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 LIM2P55344 173 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 ACTR3P61158 418 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 STXBP1P61764 594 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 ESRRGP62508 458 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 ZNF846Q147U1 533 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 MEP1AQ16819 746 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 FAM91A1Q658Y4 838 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 FJX1Q86VR8 437 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 KRT78Q8N1N4 520 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 PLD6Q8N2A8 252 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 LIX1Q8N485 282 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 ZNF321PQ8N8H1 164 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 APCDD1LQ8NCL9 501 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 OR2L5Q8NG80 312 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 STAG3L4Q8TBR4 150 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 MARC2Q969Z3 335 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 PTCD3Q96EY7 689 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 NSL1Q96IY1 281 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 TMEM68Q96MH6 324 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 GPR78Q96P69 363 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 DOK1Q99704 481 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 CDC42EP4Q9H3Q1 356 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 NT5DC2Q9H857 520 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 TRIM45Q9H8W5 580 aaPredicted RBP8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 LIN28AQ9H9Z2 209 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 SLC35C2Q9NQQ7 365 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 PRDM7Q9NQW5 492 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 NUDT4Q9NZJ9 180 aa8.99□□□□□ -0.97
NIF3L1-202ENST00000409020 TRBV11-1A0A0K0K1C0 115 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 ANKDD1BA6NHY2 528 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 CYR61O00622 381 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 ZG16O60844 167 aa8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 SIX3O95343 332 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-202ENST00000409020 F12P00748 615 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms