RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 FUT5Q11128 374 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 PUM1Q14671 1186 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 NSDHLQ15738 373 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 CSRP2Q16527 193 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 SYT16Q17RD7 645 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 MICAQ29983 383 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 LIN52Q52LA3 116 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 OTUD3Q5T2D3 398 aaPredicted RBP9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 RNF220Q5VTB9 566 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 MLIPQ5VWP3 458 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 KDM4DQ6B0I6 523 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 FAHD1Q6P587 224 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 FRRS1Q6ZNA5 592 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 GALNT10Q86SR1 603 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 ZNF605Q86T29 641 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 CARM1Q86X55 608 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 GRAMD2AQ8IUY3 354 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 APLFQ8IW19 511 aaPredicted RBP9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 CMIPQ8IY22 773 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 SMYD1Q8NB12 490 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 SUMF1Q8NBK3 374 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 C17orf47Q8NEP4 570 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 GPR32P1Q8NGA4 272 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 PHF10Q8WUB8 498 aaKnown RBP9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 CDS1Q92903 461 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 SENP5Q96HI0 755 aaPredicted RBP9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 ARHGDIGQ99819 225 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 C19orf25Q9UFG5 118 aaPredicted RBP9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 TMCC3Q9ULS5 477 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 PCDHGA10Q9Y5H3 936 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 LYVE1Q9Y5Y7 322 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 MAU2Q9Y6X3 613 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 R4GN57 208 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 NINQ8N4C6 2090 aa9.6□□□□□ -0.87
SNORD88C-201ENST00000408061 ASCC3Q8N3C0 2202 aaKnown RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 A0A1W2PRQ8 180 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 VSTM2BA6NLU5 285 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 C17orf105B2RV13 164 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 TGFBR3LH3BV60 316 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 CDX4O14627 284 aaPredicted RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 KIAA0513O60268 411 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 TNFAIP8O95379 198 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 RECKO95980 971 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 H1F0P07305 194 aaKnown RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 RPSAP08865 295 aaKnown RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 ZGLP1P0C6A0 271 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 ITGAMP11215 1152 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 NID1P14543 1247 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 MAOAP21397 527 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 PIGAP37287 484 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 IFNGR2P38484 337 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 LIMS1P48059 325 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 CHN2P52757 468 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 PSG6Q00889 435 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 COX10Q12887 443 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 ZNF155Q12901 538 aaPredicted RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 EIF3IQ13347 325 aaKnown RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 DGCR6Q14129 220 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 ERV3-1Q14264 604 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 MINDY4Q4G0A6 757 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 RPS26P11Q5JNZ5 115 aaPredicted RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 ZNF385CQ66K41 422 aaPredicted RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 TYW3Q6IPR3 259 aaKnown RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 KRT80Q6KB66 452 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 PWWP2BQ6NUJ5 590 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 TCTN3Q6NUS6 607 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 TBPL2Q6SJ96 375 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 TSEN54Q7Z6J9 526 aaKnown RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 NAXDQ8IW45 347 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 CHERPQ8IWX8 916 aaKnown RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 TAGAPQ8N103 731 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 CACTIN-AS1Q8N1I8 211 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 BMPERQ8N8U9 685 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 SETD9Q8NE22 299 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 OR4C15Q8NGM1 316 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 OR10Q1Q8NGQ4 319 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 STT3BQ8TCJ2 826 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 PTPMT1Q8WUK0 201 aaPredicted RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 METTL21AQ8WXB1 218 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 PRRC1Q96M27 445 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 CTRCQ99895 268 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 B3GNT4Q9C0J1 378 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 SYNDIG1Q9H7V2 258 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 ZNF556Q9HAH1 456 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 HHATLQ9HCP6 504 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 RXFP3Q9NSD7 469 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 PNPLA3Q9NST1 481 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 ACER3Q9NUN7 267 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 PDP1Q9P0J1 537 aaPredicted RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 COPS7AQ9UBW8 275 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 SCOCQ9UIL1 159 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 MKL2Q9ULH7 1088 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 PPIEQ9UNP9 301 aaKnown RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 MGAT4BQ9UQ53 548 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 ERVK-19Q9WJR5 959 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 POFUT2Q9Y2G5 429 aa9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 GPR55Q9Y2T6 319 aaPredicted RBP9.59□□□□□ -0.87
SNORD88C-201ENST00000408061 KCNE3Q9Y6H6 103 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms